Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 KRT8P41-201ENST00000533985 1514 ntBASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 RPS2P4-201ENST00000476944 856 ntBASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.83■□□□□ 0.77
CSPG4P5Q96PW8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.83■□□□□ 0.76
CSPG4P5Q96PW8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 AL353807.1-201ENST00000427475 662 ntBASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 AC004980.1-204ENST00000429707 299 ntBASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 AF186192.3-201ENST00000583427 947 ntBASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSPG4P5Q96PW8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 AL158047.1-201ENST00000445918 881 ntBASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 KSR1P1-201ENST00000446298 240 ntBASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSPG4P5Q96PW8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CSPG4P5Q96PW8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms