Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 AC026471.1-201ENST00000564629 3026 ntBASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 DUSP5P2-201ENST00000426873 1033 ntBASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CDCA4P2-201ENST00000441182 718 ntBASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 AL121906.2-201ENST00000621597 723 ntBASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC44A1Q8WWI5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A1Q8WWI5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC44A1Q8WWI5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
SLC44A1Q8WWI5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC44A1Q8WWI5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 BICD1-207ENST00000551848 1962 ntBASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 MIPEPP3-201ENST00000412105 444 ntBASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 LETM1P2-201ENST00000597330 2178 ntBASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC44A1Q8WWI5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 KRT18P16-201ENST00000510337 1294 ntBASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC44A1Q8WWI5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC44A1Q8WWI5 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms