Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AF186192.3-201ENST00000583427 947 ntBASIC20.64■□□□□ 0.89
LMO3Q8TAP4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 AC142381.4-202ENST00000563973 229 ntBASIC20.63■□□□□ 0.89
LMO3Q8TAP4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LMO3Q8TAP4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 AL020996.1-203ENST00000536896 2307 ntBASIC20.62■□□□□ 0.89
LMO3Q8TAP4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.62■□□□□ 0.89
LMO3Q8TAP4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 AL353807.1-201ENST00000427475 662 ntBASIC20.61■□□□□ 0.89
LMO3Q8TAP4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 AP002982.1-201ENST00000492365 877 ntBASIC20.61■□□□□ 0.89
LMO3Q8TAP4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 AC131212.4-201ENST00000623606 975 ntBASIC20.61■□□□□ 0.89
LMO3Q8TAP4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LMO3Q8TAP4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.6■□□□□ 0.89
LMO3Q8TAP4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms