Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS1Q8NFJ9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 IRX1P1-201ENST00000438849 1838 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC005332.8-201ENST00000622750 2735 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC073210.2-201ENST00000430369 194 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC022517.1-201ENST00000592429 346 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 AC093525.10-201ENST00000625130 1569 ntBASIC17.28■□□□□ 0.36
BBS1Q8NFJ9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 AF201337.1-201ENST00000520239 748 ntBASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 AL512353.2-201ENST00000448759 1962 ntBASIC17.27■□□□□ 0.36
BBS1Q8NFJ9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 AC090164.3-201ENST00000610780 2143 ntBASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.35
BBS1Q8NFJ9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 RPS2P52-201ENST00000469610 820 ntBASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 AC073111.5-205ENST00000641717 521 ntBASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 AC135050.7-201ENST00000624508 2218 ntBASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BBS1Q8NFJ9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms