Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 AC069148.1-201ENST00000608741 768 ntBASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 AC093458.2-201ENST00000623150 629 ntBASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 KRT8P41-201ENST00000533985 1514 ntBASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 AL450487.1-201ENST00000426799 995 ntBASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 TPM4P1-201ENST00000436100 807 ntBASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 SMG8-203ENST00000578922 2178 ntBASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNPOQ8N3V7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 DUSP5P1-201ENST00000441325 1139 ntBASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 HCG4P8-203ENST00000443049 980 ntBASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNPOQ8N3V7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 KRT8P45-201ENST00000414328 1447 ntBASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 VENTXP5-201ENST00000523979 775 ntBASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPOQ8N3V7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 STARP1-201ENST00000397973 869 ntBASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 AL121894.2-201ENST00000602977 491 ntBASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SYNPOQ8N3V7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms