Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 AC126544.1-201ENST00000580842 1059 ntBASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 AC233992.3-201ENST00000607491 485 ntBASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CROCCP3Q8IVE0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 GNAS-203ENST00000306120 1878 ntBASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CROCCP3Q8IVE0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 PKD1P1-201ENST00000458669 6805 ntBASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 AL513477.1-201ENST00000602865 2407 ntBASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 AC012317.2-201ENST00000623305 2251 ntBASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CROCCP3Q8IVE0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CROCCP3Q8IVE0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CROCCP3Q8IVE0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CROCCP3Q8IVE0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CROCCP3Q8IVE0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms