Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM1Q86UE6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 AC018470.1-201ENST00000624790 3129 ntBASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 AC016769.1-201ENST00000409132 1010 ntBASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 AL512625.2-201ENST00000417533 625 ntBASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 NOC2LP1-202ENST00000452600 2235 ntBASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM1Q86UE6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 FZD10-202ENST00000539839 3282 ntBASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 AC006015.1-201ENST00000429970 570 ntBASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 AC231657.2-201ENST00000624556 255 ntBASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRTM1Q86UE6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 AL133373.2-201ENST00000623187 2828 ntBASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 AC007322.1-201ENST00000426983 750 ntBASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 LTB4R2-202ENST00000528054 3092 ntBASIC16.66■□□□□ 0.26
LRRTM1Q86UE6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms