Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 AC120498.8-201ENST00000614275 531 ntBASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF880Q6PDB4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF880Q6PDB4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF880Q6PDB4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF880Q6PDB4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF880Q6PDB4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF880Q6PDB4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 AL121829.2-201ENST00000620908 328 ntBASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF880Q6PDB4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF880Q6PDB4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 FP475955.4-201ENST00000623131 1990 ntBASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 AC093525.10-201ENST00000625130 1569 ntBASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 AC083880.1-201ENST00000608266 535 ntBASIC16.06■□□□□ 0.16
ZNF880Q6PDB4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms