Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RPS28P62857 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 AC104640.1-201ENST00000562617 2109 ntBASIC11.18□□□□□ -0.62
RPS28P62857 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.18□□□□□ -0.62
RPS28P62857 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RPS28P62857 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RPS28P62857 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RPS28P62857 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
RPS28P62857 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 AC105917.1-201ENST00000506637 2539 ntBASIC11.17□□□□□ -0.62
RPS28P62857 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RPS28P62857 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 H19-201ENST00000411754 1788 ntTSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
RPS28P62857 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.17□□□□□ -0.62
RPS28P62857 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPS28P62857 NFIC-211ENST00000641145 8399 ntBASIC11.17□□□□□ -0.62
RPS28P62857 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
RPS28P62857 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
RPS28P62857 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.16□□□□□ -0.62
RPS28P62857 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.16□□□□□ -0.62
RPS28P62857 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC11.16□□□□□ -0.62
RPS28P62857 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.16□□□□□ -0.62
RPS28P62857 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.16□□□□□ -0.62
RPS28P62857 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RPS28P62857 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RPS28P62857 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.16□□□□□ -0.62
RPS28P62857 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
RPS28P62857 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPS28P62857 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
RPS28P62857 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.16□□□□□ -0.62
RPS28P62857 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.16□□□□□ -0.62
RPS28P62857 AL031598.1-201ENST00000561511 1773 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms