Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H2BDP58876 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H2BDP58876 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 DUX4L9-201ENST00000449051 1259 ntBASIC14.53□□□□□ -0.08
HIST1H2BDP58876 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 MIR3648-2-201ENST00000581792 180 ntBASIC14.53□□□□□ -0.08
HIST1H2BDP58876 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 MIR3648-1-201ENST00000615959 180 ntBASIC14.53□□□□□ -0.08
HIST1H2BDP58876 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H2BDP58876 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST1H2BDP58876 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms