Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RAD23BP54727 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 AC005332.7-201ENST00000614046 2005 ntBASIC20.55■□□□□ 0.88
RAD23BP54727 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 Z85996.1-201ENST00000494644 937 ntBASIC20.55■□□□□ 0.88
RAD23BP54727 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.55■□□□□ 0.88
RAD23BP54727 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.55■□□□□ 0.88
RAD23BP54727 AC131212.4-201ENST00000623606 975 ntBASIC20.55■□□□□ 0.88
RAD23BP54727 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAD23BP54727 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAD23BP54727 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.54■□□□□ 0.88
RAD23BP54727 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 AL032819.2-201ENST00000624543 2162 ntBASIC20.54■□□□□ 0.88
RAD23BP54727 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.54■□□□□ 0.88
RAD23BP54727 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.54■□□□□ 0.88
RAD23BP54727 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 AP001412.1-201ENST00000608405 714 ntBASIC20.54■□□□□ 0.88
RAD23BP54727 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RAD23BP54727 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAD23BP54727 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.54■□□□□ 0.88
RAD23BP54727 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
RAD23BP54727 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAD23BP54727 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.53■□□□□ 0.88
RAD23BP54727 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.53■□□□□ 0.88
RAD23BP54727 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
RAD23BP54727 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RAD23BP54727 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAD23BP54727 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
RAD23BP54727 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 MIR718-201ENST00000390190 70 ntBASIC20.53■□□□□ 0.88
RAD23BP54727 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.53■□□□□ 0.88
RAD23BP54727 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.53■□□□□ 0.88
RAD23BP54727 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RAD23BP54727 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.53■□□□□ 0.88
RAD23BP54727 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.53■□□□□ 0.88
RAD23BP54727 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAD23BP54727 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAD23BP54727 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 KRT8P41-201ENST00000533985 1514 ntBASIC20.53■□□□□ 0.88
RAD23BP54727 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAD23BP54727 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAD23BP54727 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAD23BP54727 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAD23BP54727 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RAD23BP54727 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.52■□□□□ 0.88
RAD23BP54727 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.52■□□□□ 0.88
RAD23BP54727 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RAD23BP54727 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.52■□□□□ 0.88
RAD23BP54727 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.52■□□□□ 0.88
RAD23BP54727 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.52■□□□□ 0.88
RAD23BP54727 AL031985.4-201ENST00000642138 673 ntBASIC20.52■□□□□ 0.88
RAD23BP54727 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAD23BP54727 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.52■□□□□ 0.88
RAD23BP54727 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms