Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.6■□□□□ 0.57
CLCN2P51788 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.6■□□□□ 0.57
CLCN2P51788 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLCN2P51788 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN2P51788 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLCN2P51788 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN2P51788 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCN2P51788 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CLCN2P51788 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCN2P51788 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 AC120498.9-201ENST00000339021 3867 ntBASIC18.59■□□□□ 0.57
CLCN2P51788 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
CLCN2P51788 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CLCN2P51788 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN2P51788 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCN2P51788 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCN2P51788 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCN2P51788 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.58■□□□□ 0.57
CLCN2P51788 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN2P51788 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN2P51788 KRT8P17-201ENST00000453110 1448 ntBASIC18.58■□□□□ 0.57
CLCN2P51788 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN2P51788 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.58■□□□□ 0.57
CLCN2P51788 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN2P51788 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CLCN2P51788 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLCN2P51788 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN2P51788 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCN2P51788 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCN2P51788 AC142381.4-202ENST00000563973 229 ntBASIC18.58■□□□□ 0.56
CLCN2P51788 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCN2P51788 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCN2P51788 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.58■□□□□ 0.56
CLCN2P51788 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLCN2P51788 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CLCN2P51788 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.58■□□□□ 0.56
CLCN2P51788 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CLCN2P51788 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CLCN2P51788 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCN2P51788 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLCN2P51788 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCN2P51788 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CLCN2P51788 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.57■□□□□ 0.56
CLCN2P51788 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.57■□□□□ 0.56
CLCN2P51788 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCN2P51788 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCN2P51788 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLCN2P51788 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCN2P51788 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.56■□□□□ 0.56
CLCN2P51788 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLCN2P51788 AC009237.14-201ENST00000609975 1594 ntBASIC18.56■□□□□ 0.56
CLCN2P51788 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCN2P51788 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLCN2P51788 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCN2P51788 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCN2P51788 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms