Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
CHKAP35790 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CHKAP35790 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.29■□□□□ 0.84
CHKAP35790 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHKAP35790 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.29■□□□□ 0.84
CHKAP35790 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CHKAP35790 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 NIFKP9-201ENST00000419265 221 ntBASIC20.29■□□□□ 0.84
CHKAP35790 FAM197Y1-201ENST00000421178 764 ntBASIC20.29■□□□□ 0.84
CHKAP35790 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 KRT18P16-201ENST00000510337 1294 ntBASIC20.29■□□□□ 0.84
CHKAP35790 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.29■□□□□ 0.84
CHKAP35790 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.29■□□□□ 0.84
CHKAP35790 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.29■□□□□ 0.84
CHKAP35790 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.29■□□□□ 0.84
CHKAP35790 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.29■□□□□ 0.84
CHKAP35790 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHKAP35790 AL032819.2-201ENST00000624543 2162 ntBASIC20.28■□□□□ 0.84
CHKAP35790 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHKAP35790 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CHKAP35790 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 C1QL1P1-201ENST00000568105 661 ntBASIC20.28■□□□□ 0.84
CHKAP35790 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHKAP35790 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.28■□□□□ 0.84
CHKAP35790 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.28■□□□□ 0.84
CHKAP35790 REXO1L12P-201ENST00000622156 912 ntBASIC20.28■□□□□ 0.84
CHKAP35790 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.28■□□□□ 0.84
CHKAP35790 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 AP001271.2-201ENST00000624018 1556 ntBASIC20.28■□□□□ 0.84
CHKAP35790 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHKAP35790 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHKAP35790 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CHKAP35790 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHKAP35790 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.27■□□□□ 0.84
CHKAP35790 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.27■□□□□ 0.84
CHKAP35790 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHKAP35790 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.27■□□□□ 0.84
CHKAP35790 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.27■□□□□ 0.84
CHKAP35790 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.27■□□□□ 0.84
CHKAP35790 BX088651.1-201ENST00000540551 451 ntBASIC20.27■□□□□ 0.84
CHKAP35790 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.27■□□□□ 0.84
CHKAP35790 AP003071.4-201ENST00000562276 1284 ntBASIC20.27■□□□□ 0.84
CHKAP35790 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHKAP35790 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHKAP35790 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHKAP35790 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.27■□□□□ 0.83
CHKAP35790 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHKAP35790 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.27■□□□□ 0.83
CHKAP35790 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.26■□□□□ 0.83
CHKAP35790 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.26■□□□□ 0.83
CHKAP35790 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHKAP35790 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHKAP35790 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHKAP35790 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.26■□□□□ 0.83
CHKAP35790 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CHKAP35790 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms