Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLCN1P35523 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CLCN1P35523 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CLCN1P35523 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCN1P35523 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.83■■□□□ 1.09
CLCN1P35523 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CLCN1P35523 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 AC046158.3-201ENST00000624947 2558 ntBASIC21.83■■□□□ 1.09
CLCN1P35523 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 AC016405.3-201ENST00000607710 860 ntBASIC21.83■■□□□ 1.09
CLCN1P35523 AC013268.1-206ENST00000638368 961 ntBASIC21.83■■□□□ 1.09
CLCN1P35523 AC112229.1-201ENST00000639295 961 ntBASIC21.83■■□□□ 1.09
CLCN1P35523 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
CLCN1P35523 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.83■■□□□ 1.09
CLCN1P35523 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLCN1P35523 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN1P35523 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
CLCN1P35523 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CLCN1P35523 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN1P35523 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN1P35523 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CLCN1P35523 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CLCN1P35523 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN1P35523 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
CLCN1P35523 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.82■■□□□ 1.08
CLCN1P35523 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.82■■□□□ 1.08
CLCN1P35523 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.82■■□□□ 1.08
CLCN1P35523 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CLCN1P35523 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CLCN1P35523 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLCN1P35523 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.81■■□□□ 1.08
CLCN1P35523 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLCN1P35523 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CLCN1P35523 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CLCN1P35523 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.81■■□□□ 1.08
CLCN1P35523 MIR935-201ENST00000401179 91 ntBASIC21.81■■□□□ 1.08
CLCN1P35523 AL162412.1-201ENST00000567129 965 ntBASIC21.81■■□□□ 1.08
CLCN1P35523 FAM21FP-204ENST00000608637 956 ntBASIC21.81■■□□□ 1.08
CLCN1P35523 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.81■■□□□ 1.08
CLCN1P35523 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.81■■□□□ 1.08
CLCN1P35523 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CLCN1P35523 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCN1P35523 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCN1P35523 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCN1P35523 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLCN1P35523 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN1P35523 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN1P35523 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN1P35523 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN1P35523 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLCN1P35523 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.8■■□□□ 1.08
CLCN1P35523 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.8■■□□□ 1.08
CLCN1P35523 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.8■■□□□ 1.08
CLCN1P35523 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCN1P35523 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN1P35523 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLCN1P35523 LTF-203ENST00000426532 2494 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCN1P35523 KRT8P36-201ENST00000489121 1440 ntBASIC21.8■■□□□ 1.08
CLCN1P35523 AC068338.2-201ENST00000563278 1430 ntBASIC21.8■■□□□ 1.08
CLCN1P35523 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.8■■□□□ 1.08
CLCN1P35523 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCN1P35523 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCN1P35523 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms