Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PTPN7P35236 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPN7P35236 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
PTPN7P35236 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN7P35236 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN7P35236 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPN7P35236 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN7P35236 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PTPN7P35236 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN7P35236 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN7P35236 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN7P35236 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PTPN7P35236 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PTPN7P35236 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN7P35236 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN7P35236 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN7P35236 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN7P35236 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPN7P35236 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPN7P35236 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN7P35236 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
PTPN7P35236 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN7P35236 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN7P35236 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN7P35236 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN7P35236 TSPY21P-201ENST00000433481 731 ntBASIC19.88■□□□□ 0.77
PTPN7P35236 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN7P35236 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN7P35236 HLA-A-209ENST00000638375 975 ntBASIC19.88■□□□□ 0.77
PTPN7P35236 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN7P35236 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN7P35236 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN7P35236 Z98044.1-201ENST00000632503 1764 ntBASIC19.88■□□□□ 0.77
PTPN7P35236 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN7P35236 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 NBPF21P-201ENST00000425093 1451 ntBASIC19.87■□□□□ 0.77
PTPN7P35236 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PTPN7P35236 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN7P35236 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTPN7P35236 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPN7P35236 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN7P35236 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN7P35236 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN7P35236 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN7P35236 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN7P35236 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN7P35236 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN7P35236 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN7P35236 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PTPN7P35236 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN7P35236 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.86■□□□□ 0.77
PTPN7P35236 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN7P35236 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPN7P35236 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms