Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT4P19013 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
KRT4P19013 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
KRT4P19013 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT4P19013 AC016769.1-201ENST00000409132 1010 ntBASIC19.29■□□□□ 0.68
KRT4P19013 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT4P19013 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT4P19013 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT4P19013 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
KRT4P19013 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT4P19013 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT4P19013 AC104417.2-201ENST00000562989 1793 ntBASIC19.29■□□□□ 0.68
KRT4P19013 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT4P19013 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
KRT4P19013 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT4P19013 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KRT4P19013 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
KRT4P19013 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.28■□□□□ 0.68
KRT4P19013 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.28■□□□□ 0.68
KRT4P19013 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.28■□□□□ 0.68
KRT4P19013 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT4P19013 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KRT4P19013 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT4P19013 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 HCG11-201ENST00000411553 5696 ntBASIC19.28■□□□□ 0.68
KRT4P19013 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT4P19013 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT4P19013 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT4P19013 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT4P19013 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT4P19013 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.27■□□□□ 0.68
KRT4P19013 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.27■□□□□ 0.68
KRT4P19013 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
KRT4P19013 GPX1P1-201ENST00000388829 606 ntBASIC19.27■□□□□ 0.68
KRT4P19013 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.27■□□□□ 0.68
KRT4P19013 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.27■□□□□ 0.68
KRT4P19013 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT4P19013 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT4P19013 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT4P19013 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT4P19013 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
KRT4P19013 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
KRT4P19013 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.27■□□□□ 0.67
KRT4P19013 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT4P19013 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT4P19013 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRT4P19013 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT4P19013 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
KRT4P19013 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT4P19013 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.27■□□□□ 0.67
KRT4P19013 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
KRT4P19013 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.26■□□□□ 0.67
KRT4P19013 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT4P19013 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KRT4P19013 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms