Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.17■□□□□ 0.98
SRGAP2CP0DJJ0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
SRGAP2CP0DJJ0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SRGAP2CP0DJJ0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 AC073130.3-201ENST00000624389 2278 ntBASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 AC005521.1-201ENST00000393351 872 ntBASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 AFG3L1P-217ENST00000557444 2447 ntBASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.16■□□□□ 0.98
SRGAP2CP0DJJ0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRGAP2CP0DJJ0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 KRT8P11-201ENST00000409686 1436 ntBASIC21.14■□□□□ 0.98
SRGAP2CP0DJJ0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 SLC25A3P1-201ENST00000443844 931 ntBASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 CKBP1-201ENST00000565489 1086 ntBASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 RN7SL850P-201ENST00000579959 291 ntBASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
SRGAP2CP0DJJ0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 AC128688.1-201ENST00000487626 519 ntBASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRGAP2CP0DJJ0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms