Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC1P07992 AL135905.2-201ENST00000584934 1404 ntBASIC17.04■□□□□ 0.32
ERCC1P07992 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC1P07992 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC1P07992 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC1P07992 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.03■□□□□ 0.32
ERCC1P07992 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC1P07992 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC1P07992 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC1P07992 MTDHP1-201ENST00000605323 784 ntBASIC17.03■□□□□ 0.32
ERCC1P07992 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC1P07992 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC1P07992 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC1P07992 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC1P07992 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC1P07992 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ERCC1P07992 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC1P07992 AC020763.4-201ENST00000623414 4170 ntBASIC17.03■□□□□ 0.32
ERCC1P07992 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC1P07992 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ERCC1P07992 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ERCC1P07992 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC1P07992 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ERCC1P07992 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.02■□□□□ 0.32
ERCC1P07992 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.02■□□□□ 0.32
ERCC1P07992 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.02■□□□□ 0.32
ERCC1P07992 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC1P07992 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ERCC1P07992 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC1P07992 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC1P07992 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ERCC1P07992 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC1P07992 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.02■□□□□ 0.31
ERCC1P07992 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC1P07992 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.02■□□□□ 0.31
ERCC1P07992 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ERCC1P07992 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC1P07992 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC1P07992 AL032819.2-201ENST00000624543 2162 ntBASIC17.01■□□□□ 0.31
ERCC1P07992 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC1P07992 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.01■□□□□ 0.31
ERCC1P07992 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC1P07992 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ERCC1P07992 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC1P07992 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.01■□□□□ 0.31
ERCC1P07992 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC1P07992 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
ERCC1P07992 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC1P07992 AC233263.1-201ENST00000578059 224 ntBASIC17.01■□□□□ 0.31
ERCC1P07992 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC1P07992 AC110285.5-201ENST00000611501 352 ntBASIC17.01■□□□□ 0.31
ERCC1P07992 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC1P07992 AL023875.1-201ENST00000640777 796 ntBASIC17.01■□□□□ 0.31
ERCC1P07992 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms