Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD3DP04234 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 MCRIP2P1-201ENST00000394346 511 ntBASIC16.32■□□□□ 0.2
CD3DP04234 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.32■□□□□ 0.2
CD3DP04234 TERF1P5-201ENST00000477545 1207 ntBASIC16.32■□□□□ 0.2
CD3DP04234 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.32■□□□□ 0.2
CD3DP04234 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CD3DP04234 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.32■□□□□ 0.2
CD3DP04234 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 AC067852.2-201ENST00000590513 2313 ntBASIC16.32■□□□□ 0.2
CD3DP04234 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.32■□□□□ 0.2
CD3DP04234 AC018553.1-201ENST00000616682 1458 ntBASIC16.32■□□□□ 0.2
CD3DP04234 AC105020.6-201ENST00000621523 1217 ntBASIC16.32■□□□□ 0.2
CD3DP04234 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.32■□□□□ 0.2
CD3DP04234 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.32■□□□□ 0.2
CD3DP04234 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.32■□□□□ 0.2
CD3DP04234 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD3DP04234 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD3DP04234 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD3DP04234 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD3DP04234 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.31■□□□□ 0.2
CD3DP04234 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.31■□□□□ 0.2
CD3DP04234 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.31■□□□□ 0.2
CD3DP04234 AC131212.1-201ENST00000613771 668 ntBASIC16.31■□□□□ 0.2
CD3DP04234 MYCNOS-205ENST00000641950 531 ntBASIC16.31■□□□□ 0.2
CD3DP04234 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CD3DP04234 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.31■□□□□ 0.2
CD3DP04234 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD3DP04234 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
CD3DP04234 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
CD3DP04234 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.3■□□□□ 0.2
CD3DP04234 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CD3DP04234 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.3■□□□□ 0.2
CD3DP04234 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.3■□□□□ 0.2
CD3DP04234 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.3■□□□□ 0.2
CD3DP04234 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CD3DP04234 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
CD3DP04234 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD3DP04234 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 AL162412.1-201ENST00000567129 965 ntBASIC16.3■□□□□ 0.2
CD3DP04234 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD3DP04234 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.3■□□□□ 0.2
CD3DP04234 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CD3DP04234 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD3DP04234 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD3DP04234 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.29■□□□□ 0.2
CD3DP04234 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD3DP04234 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD3DP04234 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD3DP04234 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD3DP04234 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.29■□□□□ 0.2
CD3DP04234 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms