Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM3O75382 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM3O75382 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM3O75382 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM3O75382 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM3O75382 AL353807.1-201ENST00000427475 662 ntBASIC17.92■□□□□ 0.46
TRIM3O75382 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM3O75382 MIR4497-201ENST00000583208 89 ntBASIC17.92■□□□□ 0.46
TRIM3O75382 AF186192.3-201ENST00000583427 947 ntBASIC17.92■□□□□ 0.46
TRIM3O75382 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM3O75382 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM3O75382 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM3O75382 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM3O75382 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM3O75382 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM3O75382 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM3O75382 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM3O75382 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM3O75382 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 AC004408.2-201ENST00000623613 2777 ntBASIC17.91■□□□□ 0.46
TRIM3O75382 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 AL691432.2-201ENST00000607222 2038 ntBASIC17.91■□□□□ 0.46
TRIM3O75382 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM3O75382 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 KRT18P16-201ENST00000510337 1294 ntBASIC17.91■□□□□ 0.46
TRIM3O75382 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM3O75382 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM3O75382 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM3O75382 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM3O75382 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM3O75382 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM3O75382 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM3O75382 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.9■□□□□ 0.46
TRIM3O75382 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM3O75382 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM3O75382 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 SNORA78-201ENST00000459373 127 ntBASIC17.9■□□□□ 0.46
TRIM3O75382 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM3O75382 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.9■□□□□ 0.46
TRIM3O75382 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM3O75382 AL353708.3-201ENST00000610272 989 ntBASIC17.9■□□□□ 0.46
TRIM3O75382 AC113410.3-201ENST00000623366 203 ntBASIC17.9■□□□□ 0.46
TRIM3O75382 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRIM3O75382 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM3O75382 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM3O75382 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM3O75382 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM3O75382 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM3O75382 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRIM3O75382 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM3O75382 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM3O75382 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM3O75382 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms