Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.87■■□□□ 1.09
CCNT1O60563 TEX21P-204ENST00000641479 1693 ntBASIC21.87■■□□□ 1.09
CCNT1O60563 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCNT1O60563 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNT1O60563 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.86■■□□□ 1.09
CCNT1O60563 KRT8P41-201ENST00000533985 1514 ntBASIC21.86■■□□□ 1.09
CCNT1O60563 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CCNT1O60563 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CCNT1O60563 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.86■■□□□ 1.09
CCNT1O60563 TSPY7P-201ENST00000431358 1114 ntBASIC21.86■■□□□ 1.09
CCNT1O60563 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.86■■□□□ 1.09
CCNT1O60563 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNT1O60563 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.85■■□□□ 1.09
CCNT1O60563 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CCNT1O60563 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNT1O60563 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CCNT1O60563 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNT1O60563 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CCNT1O60563 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CCNT1O60563 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CCNT1O60563 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CCNT1O60563 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.85■■□□□ 1.09
CCNT1O60563 SNORA78-201ENST00000459373 127 ntBASIC21.85■■□□□ 1.09
CCNT1O60563 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.85■■□□□ 1.09
CCNT1O60563 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.85■■□□□ 1.09
CCNT1O60563 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CCNT1O60563 AC026271.3-201ENST00000571884 352 ntBASIC21.85■■□□□ 1.09
CCNT1O60563 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.85■■□□□ 1.09
CCNT1O60563 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNT1O60563 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCNT1O60563 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNT1O60563 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNT1O60563 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.84■■□□□ 1.09
CCNT1O60563 RCC2P6-201ENST00000526625 1557 ntBASIC21.84■■□□□ 1.09
CCNT1O60563 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.84■■□□□ 1.09
CCNT1O60563 NUDT16P1-203ENST00000513809 620 ntBASIC21.84■■□□□ 1.09
CCNT1O60563 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.84■■□□□ 1.09
CCNT1O60563 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNT1O60563 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCNT1O60563 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNT1O60563 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
CCNT1O60563 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCNT1O60563 AL355355.2-201ENST00000442321 338 ntBASIC21.83■■□□□ 1.09
CCNT1O60563 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.83■■□□□ 1.09
CCNT1O60563 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCNT1O60563 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.83■■□□□ 1.09
CCNT1O60563 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.83■■□□□ 1.09
CCNT1O60563 AC026471.5-201ENST00000615068 467 ntBASIC21.83■■□□□ 1.09
CCNT1O60563 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCNT1O60563 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCNT1O60563 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCNT1O60563 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.83■■□□□ 1.08
CCNT1O60563 AIRN-201ENST00000601203 4374 ntBASIC21.83■■□□□ 1.08
CCNT1O60563 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.83■■□□□ 1.08
CCNT1O60563 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCNT1O60563 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNT1O60563 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCNT1O60563 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNT1O60563 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms