Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXD2O60548 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXD2O60548 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXD2O60548 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXD2O60548 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXD2O60548 TUBB8P6-201ENST00000436895 1288 ntBASIC19.33■□□□□ 0.68
FOXD2O60548 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.33■□□□□ 0.68
FOXD2O60548 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXD2O60548 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
FOXD2O60548 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXD2O60548 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXD2O60548 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXD2O60548 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
FOXD2O60548 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXD2O60548 AC092338.2-201ENST00000568827 1415 ntBASIC19.33■□□□□ 0.68
FOXD2O60548 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
FOXD2O60548 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXD2O60548 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXD2O60548 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FOXD2O60548 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXD2O60548 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXD2O60548 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FOXD2O60548 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FOXD2O60548 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXD2O60548 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXD2O60548 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
FOXD2O60548 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXD2O60548 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXD2O60548 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXD2O60548 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 AC026471.1-201ENST00000564629 3026 ntBASIC19.31■□□□□ 0.68
FOXD2O60548 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXD2O60548 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXD2O60548 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXD2O60548 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXD2O60548 VENTXP5-201ENST00000523979 775 ntBASIC19.31■□□□□ 0.68
FOXD2O60548 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXD2O60548 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 RCC2P6-201ENST00000526625 1557 ntBASIC19.31■□□□□ 0.68
FOXD2O60548 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXD2O60548 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXD2O60548 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXD2O60548 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXD2O60548 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXD2O60548 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXD2O60548 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXD2O60548 KRT18P16-201ENST00000510337 1294 ntBASIC19.3■□□□□ 0.68
FOXD2O60548 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
FOXD2O60548 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
FOXD2O60548 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXD2O60548 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXD2O60548 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXD2O60548 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXD2O60548 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
FOXD2O60548 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXD2O60548 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXD2O60548 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXD2O60548 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXD2O60548 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXD2O60548 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXD2O60548 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
FOXD2O60548 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXD2O60548 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXD2O60548 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXD2O60548 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms