Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 AL353807.1-201ENST00000427475 662 ntBASIC17.14■□□□□ 0.33
TRAF3IP2O43734 AL158047.1-201ENST00000445918 881 ntBASIC17.14■□□□□ 0.33
TRAF3IP2O43734 AP002982.1-201ENST00000492365 877 ntBASIC17.14■□□□□ 0.33
TRAF3IP2O43734 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAF3IP2O43734 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 Z85996.1-201ENST00000494644 937 ntBASIC17.13■□□□□ 0.33
TRAF3IP2O43734 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 AF186192.3-201ENST00000583427 947 ntBASIC17.13■□□□□ 0.33
TRAF3IP2O43734 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAF3IP2O43734 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 KSR1P1-201ENST00000446298 240 ntBASIC17.12■□□□□ 0.33
TRAF3IP2O43734 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 RPS2P4-201ENST00000476944 856 ntBASIC17.12■□□□□ 0.33
TRAF3IP2O43734 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 TMEM191A-211ENST00000637163 1067 ntBASIC17.12■□□□□ 0.33
TRAF3IP2O43734 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAF3IP2O43734 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 KRT8P41-201ENST00000533985 1514 ntBASIC17.11■□□□□ 0.33
TRAF3IP2O43734 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 AC004980.1-204ENST00000429707 299 ntBASIC17.11■□□□□ 0.33
TRAF3IP2O43734 UBE2SP1-201ENST00000450587 669 ntBASIC17.11■□□□□ 0.33
TRAF3IP2O43734 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms