Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 ARMC10P1-201ENST00000313754 855 ntBASIC23.18■■□□□ 1.3
SEMA3EO15041 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.18■■□□□ 1.3
SEMA3EO15041 COX11P1-201ENST00000489116 835 ntBASIC23.18■■□□□ 1.3
SEMA3EO15041 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SEMA3EO15041 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.18■■□□□ 1.3
SEMA3EO15041 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.18■■□□□ 1.3
SEMA3EO15041 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.18■■□□□ 1.3
SEMA3EO15041 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SEMA3EO15041 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SEMA3EO15041 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SEMA3EO15041 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.18■■□□□ 1.3
SEMA3EO15041 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.17■■□□□ 1.3
SEMA3EO15041 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
SEMA3EO15041 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
SEMA3EO15041 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.17■■□□□ 1.3
SEMA3EO15041 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.17■■□□□ 1.3
SEMA3EO15041 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.17■■□□□ 1.3
SEMA3EO15041 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SEMA3EO15041 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SEMA3EO15041 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SEMA3EO15041 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.17■■□□□ 1.3
SEMA3EO15041 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.17■■□□□ 1.3
SEMA3EO15041 AC139887.4-201ENST00000607877 719 ntBASIC23.17■■□□□ 1.3
SEMA3EO15041 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.17■■□□□ 1.3
SEMA3EO15041 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SEMA3EO15041 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
SEMA3EO15041 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.16■■□□□ 1.3
SEMA3EO15041 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.16■■□□□ 1.3
SEMA3EO15041 RNF152P1-201ENST00000397754 604 ntBASIC23.16■■□□□ 1.3
SEMA3EO15041 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.16■■□□□ 1.3
SEMA3EO15041 YBX1P2-201ENST00000489612 999 ntBASIC23.16■■□□□ 1.3
SEMA3EO15041 AC022616.7-201ENST00000525383 220 ntBASIC23.16■■□□□ 1.3
SEMA3EO15041 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.16■■□□□ 1.3
SEMA3EO15041 LINC01238-205ENST00000567549 1107 ntBASIC23.16■■□□□ 1.3
SEMA3EO15041 WWOX-216ENST00000569818 525 ntBASIC23.16■■□□□ 1.3
SEMA3EO15041 AL031432.5-201ENST00000641059 760 ntBASIC23.16■■□□□ 1.3
SEMA3EO15041 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.16■■□□□ 1.3
SEMA3EO15041 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SEMA3EO15041 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.16■■□□□ 1.3
SEMA3EO15041 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.16■■□□□ 1.3
SEMA3EO15041 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SEMA3EO15041 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.15■■□□□ 1.3
SEMA3EO15041 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SEMA3EO15041 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SEMA3EO15041 NTF6B-201ENST00000591913 560 ntBASIC23.15■■□□□ 1.3
SEMA3EO15041 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.15■■□□□ 1.3
SEMA3EO15041 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.15■■□□□ 1.3
SEMA3EO15041 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.15■■□□□ 1.3
SEMA3EO15041 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SEMA3EO15041 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SEMA3EO15041 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SEMA3EO15041 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.14■■□□□ 1.29
SEMA3EO15041 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SEMA3EO15041 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SEMA3EO15041 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.14■■□□□ 1.29
SEMA3EO15041 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.14■■□□□ 1.29
SEMA3EO15041 FAM8A6P-201ENST00000407496 1135 ntBASIC23.14■■□□□ 1.29
SEMA3EO15041 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms