Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC096631.2-201ENST00000436136 790 ntBASIC14.07□□□□□ -0.16
SMKR1H3BMG3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 KRT18P20-201ENST00000548986 1279 ntBASIC14.07□□□□□ -0.16
SMKR1H3BMG3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMKR1H3BMG3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 AC019069.1-201ENST00000610008 1333 ntBASIC14.06□□□□□ -0.16
SMKR1H3BMG3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMKR1H3BMG3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 EDA-201ENST00000338901 1233 ntBASIC14.05□□□□□ -0.16
SMKR1H3BMG3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 AC091305.1-201ENST00000479476 895 ntBASIC14.05□□□□□ -0.16
SMKR1H3BMG3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 AL512353.2-201ENST00000448759 1962 ntBASIC14.05□□□□□ -0.16
SMKR1H3BMG3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMKR1H3BMG3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms