Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC01546A6NGU7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC01546A6NGU7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01546A6NGU7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01546A6NGU7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
LINC01546A6NGU7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.58□□□□□ -0.23
LINC01546A6NGU7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01546A6NGU7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01546A6NGU7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AL162412.1-201ENST00000567129 965 ntBASIC13.58□□□□□ -0.24
LINC01546A6NGU7 MFSD11-216ENST00000590393 1141 ntBASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AL645608.8-201ENST00000606034 2086 ntBASIC13.58□□□□□ -0.24
LINC01546A6NGU7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 TFP1-202ENST00000475455 1573 ntBASIC13.58□□□□□ -0.24
LINC01546A6NGU7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01546A6NGU7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01546A6NGU7 AL591742.1-201ENST00000604433 565 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms