Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 AC008694.1-202ENST00000636953 945 ntBASIC20.77■□□□□ 0.92
CCDC66A2RUB6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC66A2RUB6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC66A2RUB6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 AC231657.2-201ENST00000624556 255 ntBASIC20.76■□□□□ 0.91
CCDC66A2RUB6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 AC135050.7-201ENST00000624508 2218 ntBASIC20.76■□□□□ 0.91
CCDC66A2RUB6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC66A2RUB6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 AC099398.1-201ENST00000567919 2776 ntBASIC20.75■□□□□ 0.91
CCDC66A2RUB6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 Z82202.1-201ENST00000623446 1880 ntBASIC20.75■□□□□ 0.91
CCDC66A2RUB6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC66A2RUB6 PHGDH-210ENST00000641115 1638 ntBASIC20.75■□□□□ 0.91
CCDC66A2RUB6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 AL139384.1-201ENST00000612143 3047 ntBASIC20.74■□□□□ 0.91
CCDC66A2RUB6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 AC023632.3-201ENST00000521633 145 ntBASIC20.74■□□□□ 0.91
CCDC66A2RUB6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 AL589743.5-201ENST00000616611 1050 ntBASIC20.74■□□□□ 0.91
CCDC66A2RUB6 BID-214ENST00000617586 542 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 OR10C1-204ENST00000622521 1039 ntBASIC20.74■□□□□ 0.91
CCDC66A2RUB6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 NOC2LP2-201ENST00000407594 1944 ntBASIC20.74■□□□□ 0.91
CCDC66A2RUB6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC66A2RUB6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC66A2RUB6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms