Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 C1QL1P1-201ENST00000568105 661 ntBASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 AL161938.1-201ENST00000569833 2180 ntBASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV6-4A0A1B0GX49 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 FP475955.4-201ENST00000623131 1990 ntBASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 AL020996.1-203ENST00000536896 2307 ntBASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 AC239809.2-201ENST00000415381 517 ntBASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV6-4A0A1B0GX49 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms