Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 UNC93B4-201ENST00000505679 747 ntBASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PRKY-204ENST00000533551 1019 ntBASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC093503.3-201ENST00000624917 2352 ntBASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SDHAP1-207ENST00000440850 2000 ntBASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV6-8A0A0A6YYG3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC090192.1-201ENST00000517740 490 ntBASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 RNF165-205ENST00000588679 2904 ntBASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 POM121L13P-201ENST00000422362 380 ntBASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRBV6-8A0A0A6YYG3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms