Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HTTP42858 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HTTP42858 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
HTTP42858 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.84□□□□□ -1.95
HTTP42858 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.84□□□□□ -1.95
HTTP42858 RN7SKP219-201ENST00000516825 296 ntBASIC2.84□□□□□ -1.95
HTTP42858 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.84□□□□□ -1.95
HTTP42858 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
HTTP42858 AL110115.1-201ENST00000614396 364 ntBASIC2.84□□□□□ -1.95
HTTP42858 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
HTTP42858 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.84□□□□□ -1.95
HTTP42858 AC125336.1-201ENST00000508893 2827 ntBASIC2.84□□□□□ -1.95
HTTP42858 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.84□□□□□ -1.95
HTTP42858 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
HTTP42858 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HTTP42858 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.84□□□□□ -1.95
HTTP42858 MIR499A-201ENST00000384903 122 ntBASIC2.84□□□□□ -1.95
HTTP42858 RPS7P13-201ENST00000413955 498 ntBASIC2.84□□□□□ -1.95
HTTP42858 AC245054.2-201ENST00000415639 319 ntBASIC2.84□□□□□ -1.95
HTTP42858 FAR1P1-201ENST00000427163 934 ntBASIC2.84□□□□□ -1.95
HTTP42858 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.84□□□□□ -1.95
HTTP42858 RPL30P9-201ENST00000465586 330 ntBASIC2.84□□□□□ -1.95
HTTP42858 AC018630.1-201ENST00000541376 925 ntBASIC2.84□□□□□ -1.95
HTTP42858 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.84□□□□□ -1.95
HTTP42858 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.84□□□□□ -1.95
HTTP42858 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.84□□□□□ -1.95
HTTP42858 AC010338.1-201ENST00000621823 717 ntBASIC2.84□□□□□ -1.95
HTTP42858 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HTTP42858 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HTTP42858 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.84□□□□□ -1.96
HTTP42858 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HTTP42858 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.96
HTTP42858 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.96
HTTP42858 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HTTP42858 AC103858.2-201ENST00000621471 543 ntBASIC2.84□□□□□ -1.96
HTTP42858 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HTTP42858 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HTTP42858 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
HTTP42858 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HTTP42858 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HTTP42858 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.83□□□□□ -1.96
HTTP42858 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.83□□□□□ -1.96
HTTP42858 SNORA70E-201ENST00000384492 135 ntBASIC2.83□□□□□ -1.96
HTTP42858 RNU6-253P-201ENST00000384730 105 ntBASIC2.83□□□□□ -1.96
HTTP42858 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.83□□□□□ -1.96
HTTP42858 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.83□□□□□ -1.96
HTTP42858 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.83□□□□□ -1.96
HTTP42858 AC008277.2-201ENST00000605196 797 ntBASIC2.83□□□□□ -1.96
HTTP42858 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.83□□□□□ -1.96
HTTP42858 AC087565.3-202ENST00000642085 1603 ntBASIC2.83□□□□□ -1.96
HTTP42858 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HTTP42858 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
HTTP42858 AL031595.2-201ENST00000624215 19071 ntBASIC2.82□□□□□ -1.96
HTTP42858 RNU1-73P-201ENST00000383971 164 ntBASIC2.82□□□□□ -1.96
HTTP42858 NANOGP5-201ENST00000424456 877 ntBASIC2.82□□□□□ -1.96
HTTP42858 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.82□□□□□ -1.96
HTTP42858 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
HTTP42858 HMGB1P25-201ENST00000468402 607 ntBASIC2.82□□□□□ -1.96
HTTP42858 AP001086.1-201ENST00000494882 321 ntBASIC2.82□□□□□ -1.96
HTTP42858 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.82□□□□□ -1.96
HTTP42858 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.82□□□□□ -1.96
HTTP42858 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.82□□□□□ -1.96
HTTP42858 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HTTP42858 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC2.82□□□□□ -1.96
HTTP42858 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HTTP42858 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.82□□□□□ -1.96
HTTP42858 RPL23AP36-201ENST00000413895 458 ntBASIC2.82□□□□□ -1.96
HTTP42858 RPL30P2-201ENST00000414021 291 ntBASIC2.82□□□□□ -1.96
HTTP42858 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HTTP42858 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HTTP42858 HPRT1P3-201ENST00000539521 576 ntBASIC2.82□□□□□ -1.96
HTTP42858 AC093673.2-201ENST00000609674 331 ntBASIC2.82□□□□□ -1.96
HTTP42858 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HTTP42858 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HTTP42858 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
HTTP42858 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.82□□□□□ -1.96
HTTP42858 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HTTP42858 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HTTP42858 AC006960.1-201ENST00000419980 153 ntBASIC2.82□□□□□ -1.96
HTTP42858 AL354710.1-201ENST00000453641 246 ntBASIC2.82□□□□□ -1.96
HTTP42858 AC034244.2-201ENST00000514668 858 ntBASIC2.82□□□□□ -1.96
HTTP42858 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.82□□□□□ -1.96
HTTP42858 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HTTP42858 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HTTP42858 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.81□□□□□ -1.96
HTTP42858 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HTTP42858 MUC2-202ENST00000613187 4845 ntBASIC2.81□□□□□ -1.96
HTTP42858 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HTTP42858 NPM1P10-201ENST00000398310 865 ntBASIC2.81□□□□□ -1.96
HTTP42858 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.81□□□□□ -1.96
HTTP42858 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.81□□□□□ -1.96
HTTP42858 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HTTP42858 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HTTP42858 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HTTP42858 NPM1P29-201ENST00000483112 803 ntBASIC2.81□□□□□ -1.96
HTTP42858 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.81□□□□□ -1.96
HTTP42858 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.81□□□□□ -1.96
HTTP42858 MIR4635-201ENST00000583759 79 ntBASIC2.81□□□□□ -1.96
HTTP42858 MIR4781-201ENST00000585250 76 ntBASIC2.81□□□□□ -1.96
HTTP42858 VN1R9P-201ENST00000614184 867 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms