RNA–Protein interactions for RNA: ENST00000539521.1

HPRT1P3-201, Transcript of hypoxanthine phosphoribosyltransferase 1 pseudogene 3, humanhuman

BASIC

Gene HPRT1P3, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPRT1P3-201ENST00000539521 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
HPRT1P3-201ENST00000539521 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
HPRT1P3-201ENST00000539521 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
HPRT1P3-201ENST00000539521 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
HPRT1P3-201ENST00000539521 FOXD1Q16676 465 aa18.2■□□□□ 0.5
HPRT1P3-201ENST00000539521 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
HPRT1P3-201ENST00000539521 MSH5O43196 834 aa17.23■□□□□ 0.35
HPRT1P3-201ENST00000539521 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
HPRT1P3-201ENST00000539521 ADRA2BP18089 450 aa16.89■□□□□ 0.29
HPRT1P3-201ENST00000539521 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
HPRT1P3-201ENST00000539521 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
HPRT1P3-201ENST00000539521 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
HPRT1P3-201ENST00000539521 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
HPRT1P3-201ENST00000539521 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
HPRT1P3-201ENST00000539521 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
HPRT1P3-201ENST00000539521 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
HPRT1P3-201ENST00000539521 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
HPRT1P3-201ENST00000539521 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
HPRT1P3-201ENST00000539521 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
HPRT1P3-201ENST00000539521 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
HPRT1P3-201ENST00000539521 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
HPRT1P3-201ENST00000539521 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
HPRT1P3-201ENST00000539521 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
HPRT1P3-201ENST00000539521 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
HPRT1P3-201ENST00000539521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.12
HPRT1P3-201ENST00000539521 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
HPRT1P3-201ENST00000539521 KCNA4P22459 653 aa13.91□□□□□ -0.18
HPRT1P3-201ENST00000539521 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
HPRT1P3-201ENST00000539521 CAPN15O75808 1086 aa13.8□□□□□ -0.2
HPRT1P3-201ENST00000539521 APLP2Q06481 763 aa13.74□□□□□ -0.21
HPRT1P3-201ENST00000539521 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
HPRT1P3-201ENST00000539521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
HPRT1P3-201ENST00000539521 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
HPRT1P3-201ENST00000539521 DSG3P32926 999 aa13.62□□□□□ -0.23
HPRT1P3-201ENST00000539521 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
HPRT1P3-201ENST00000539521 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
HPRT1P3-201ENST00000539521 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
HPRT1P3-201ENST00000539521 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
HPRT1P3-201ENST00000539521 ABCB7O75027 752 aa13.39□□□□□ -0.27
HPRT1P3-201ENST00000539521 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
HPRT1P3-201ENST00000539521 POTEHQ6S545 545 aa13.23□□□□□ -0.29
HPRT1P3-201ENST00000539521 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
HPRT1P3-201ENST00000539521 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
HPRT1P3-201ENST00000539521 POLA2Q14181 598 aa13.12□□□□□ -0.31
HPRT1P3-201ENST00000539521 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
HPRT1P3-201ENST00000539521 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
HPRT1P3-201ENST00000539521 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
HPRT1P3-201ENST00000539521 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
HPRT1P3-201ENST00000539521 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
HPRT1P3-201ENST00000539521 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
HPRT1P3-201ENST00000539521 ZBTB22O15209 634 aa12.69□□□□□ -0.38
HPRT1P3-201ENST00000539521 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
HPRT1P3-201ENST00000539521 FBLN2P98095 1184 aa12.61□□□□□ -0.39
HPRT1P3-201ENST00000539521 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
HPRT1P3-201ENST00000539521 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
HPRT1P3-201ENST00000539521 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
HPRT1P3-201ENST00000539521 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
HPRT1P3-201ENST00000539521 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
HPRT1P3-201ENST00000539521 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
HPRT1P3-201ENST00000539521 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
HPRT1P3-201ENST00000539521 HAX1O00165 279 aa12.35□□□□□ -0.43
HPRT1P3-201ENST00000539521 FXR2P51116 673 aaKnown RBP eCLIP12.34□□□□□ -0.43
HPRT1P3-201ENST00000539521 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
HPRT1P3-201ENST00000539521 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
HPRT1P3-201ENST00000539521 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
HPRT1P3-201ENST00000539521 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
HPRT1P3-201ENST00000539521 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
HPRT1P3-201ENST00000539521 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
HPRT1P3-201ENST00000539521 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
HPRT1P3-201ENST00000539521 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
HPRT1P3-201ENST00000539521 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
HPRT1P3-201ENST00000539521 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
HPRT1P3-201ENST00000539521 EVX2Q03828 476 aa11.98□□□□□ -0.49
HPRT1P3-201ENST00000539521 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
HPRT1P3-201ENST00000539521 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.49
HPRT1P3-201ENST00000539521 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
HPRT1P3-201ENST00000539521 GABBR2O75899 941 aa11.83□□□□□ -0.52
HPRT1P3-201ENST00000539521 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
HPRT1P3-201ENST00000539521 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
HPRT1P3-201ENST00000539521 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
HPRT1P3-201ENST00000539521 CLCN6P51797 869 aa11.77□□□□□ -0.53
HPRT1P3-201ENST00000539521 PAK3O75914 559 aaPredicted RBP11.65□□□□□ -0.54
HPRT1P3-201ENST00000539521 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
HPRT1P3-201ENST00000539521 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
HPRT1P3-201ENST00000539521 LHX8Q68G74 356 aa11.62□□□□□ -0.55
HPRT1P3-201ENST00000539521 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
HPRT1P3-201ENST00000539521 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
HPRT1P3-201ENST00000539521 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
HPRT1P3-201ENST00000539521 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
HPRT1P3-201ENST00000539521 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
HPRT1P3-201ENST00000539521 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
HPRT1P3-201ENST00000539521 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
HPRT1P3-201ENST00000539521 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
HPRT1P3-201ENST00000539521 PROM2Q8N271 834 aa11.35□□□□□ -0.59
HPRT1P3-201ENST00000539521 MIER1Q8N108 512 aa11.31□□□□□ -0.6
HPRT1P3-201ENST00000539521 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
HPRT1P3-201ENST00000539521 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
HPRT1P3-201ENST00000539521 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
HPRT1P3-201ENST00000539521 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
HPRT1P3-201ENST00000539521 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms