RNA–Protein interactions for RNA: ENST00000507772.5

CSN1S1-204, Transcript of casein alpha s1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSN1S1, Length 895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN1S1-204ENST00000507772 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
CSN1S1-204ENST00000507772 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
CSN1S1-204ENST00000507772 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
CSN1S1-204ENST00000507772 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
CSN1S1-204ENST00000507772 FOXD1Q16676 465 aa18.51■□□□□ 0.55
CSN1S1-204ENST00000507772 MSH5O43196 834 aa17.41■□□□□ 0.38
CSN1S1-204ENST00000507772 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
CSN1S1-204ENST00000507772 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
CSN1S1-204ENST00000507772 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
CSN1S1-204ENST00000507772 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
CSN1S1-204ENST00000507772 ADRA2BP18089 450 aa17.08■□□□□ 0.32
CSN1S1-204ENST00000507772 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
CSN1S1-204ENST00000507772 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
CSN1S1-204ENST00000507772 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
CSN1S1-204ENST00000507772 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
CSN1S1-204ENST00000507772 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
CSN1S1-204ENST00000507772 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
CSN1S1-204ENST00000507772 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
CSN1S1-204ENST00000507772 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
CSN1S1-204ENST00000507772 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
CSN1S1-204ENST00000507772 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
CSN1S1-204ENST00000507772 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
CSN1S1-204ENST00000507772 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
CSN1S1-204ENST00000507772 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
CSN1S1-204ENST00000507772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
CSN1S1-204ENST00000507772 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
CSN1S1-204ENST00000507772 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
CSN1S1-204ENST00000507772 CAPN15O75808 1086 aa13.86□□□□□ -0.19
CSN1S1-204ENST00000507772 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
CSN1S1-204ENST00000507772 DSG3P32926 999 aa13.82□□□□□ -0.2
CSN1S1-204ENST00000507772 KCNA4P22459 653 aa13.79□□□□□ -0.2
CSN1S1-204ENST00000507772 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
CSN1S1-204ENST00000507772 POTEHQ6S545 545 aa13.61□□□□□ -0.23
CSN1S1-204ENST00000507772 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
CSN1S1-204ENST00000507772 APLP2Q06481 763 aa13.57□□□□□ -0.24
CSN1S1-204ENST00000507772 ABCB7O75027 752 aa13.52□□□□□ -0.25
CSN1S1-204ENST00000507772 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
CSN1S1-204ENST00000507772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
CSN1S1-204ENST00000507772 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
CSN1S1-204ENST00000507772 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
CSN1S1-204ENST00000507772 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
CSN1S1-204ENST00000507772 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
CSN1S1-204ENST00000507772 POLA2Q14181 598 aa13.17□□□□□ -0.3
CSN1S1-204ENST00000507772 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
CSN1S1-204ENST00000507772 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
CSN1S1-204ENST00000507772 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
CSN1S1-204ENST00000507772 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
CSN1S1-204ENST00000507772 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
CSN1S1-204ENST00000507772 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
CSN1S1-204ENST00000507772 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
CSN1S1-204ENST00000507772 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
CSN1S1-204ENST00000507772 ZBTB22O15209 634 aa12.66□□□□□ -0.38
CSN1S1-204ENST00000507772 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
CSN1S1-204ENST00000507772 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
CSN1S1-204ENST00000507772 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
CSN1S1-204ENST00000507772 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
CSN1S1-204ENST00000507772 HAX1O00165 279 aa12.52□□□□□ -0.41
CSN1S1-204ENST00000507772 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
CSN1S1-204ENST00000507772 FBLN2P98095 1184 aa12.45□□□□□ -0.42
CSN1S1-204ENST00000507772 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
CSN1S1-204ENST00000507772 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
CSN1S1-204ENST00000507772 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
CSN1S1-204ENST00000507772 EVX2Q03828 476 aa12.32□□□□□ -0.44
CSN1S1-204ENST00000507772 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
CSN1S1-204ENST00000507772 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
CSN1S1-204ENST00000507772 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
CSN1S1-204ENST00000507772 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
CSN1S1-204ENST00000507772 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
CSN1S1-204ENST00000507772 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
CSN1S1-204ENST00000507772 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
CSN1S1-204ENST00000507772 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
CSN1S1-204ENST00000507772 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
CSN1S1-204ENST00000507772 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
CSN1S1-204ENST00000507772 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
CSN1S1-204ENST00000507772 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
CSN1S1-204ENST00000507772 GABBR2O75899 941 aa12.03□□□□□ -0.48
CSN1S1-204ENST00000507772 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
CSN1S1-204ENST00000507772 LHX8Q68G74 356 aa11.87□□□□□ -0.51
CSN1S1-204ENST00000507772 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
CSN1S1-204ENST00000507772 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
CSN1S1-204ENST00000507772 CLCN6P51797 869 aa11.75□□□□□ -0.53
CSN1S1-204ENST00000507772 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
CSN1S1-204ENST00000507772 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
CSN1S1-204ENST00000507772 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
CSN1S1-204ENST00000507772 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
CSN1S1-204ENST00000507772 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
CSN1S1-204ENST00000507772 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
CSN1S1-204ENST00000507772 GALR2O43603 387 aaPredicted RBP11.53□□□□□ -0.56
CSN1S1-204ENST00000507772 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
CSN1S1-204ENST00000507772 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSN1S1-204ENST00000507772 PHF12Q96QT6 1004 aa11.48□□□□□ -0.57
CSN1S1-204ENST00000507772 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
CSN1S1-204ENST00000507772 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
CSN1S1-204ENST00000507772 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
CSN1S1-204ENST00000507772 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
CSN1S1-204ENST00000507772 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
CSN1S1-204ENST00000507772 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
CSN1S1-204ENST00000507772 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
CSN1S1-204ENST00000507772 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
CSN1S1-204ENST00000507772 ATMINO43313 823 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms