RNA–Protein interactions for RNA: ENST00000627148.2

CGA-204, Transcript of glycoprotein hormones, alpha polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGA, Length 1,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGA-204ENST00000627148 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
CGA-204ENST00000627148 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
CGA-204ENST00000627148 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
CGA-204ENST00000627148 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
CGA-204ENST00000627148 FOXD1Q16676 465 aa21.12■□□□□ 0.97
CGA-204ENST00000627148 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
CGA-204ENST00000627148 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
CGA-204ENST00000627148 ADRA2BP18089 450 aa20.04■□□□□ 0.8
CGA-204ENST00000627148 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
CGA-204ENST00000627148 MSH5O43196 834 aa19.58■□□□□ 0.72
CGA-204ENST00000627148 POTEDQ86YR6 584 aa18.53■□□□□ 0.56
CGA-204ENST00000627148 MAPK8IP2Q13387 824 aaPredicted RBP18.32■□□□□ 0.52
CGA-204ENST00000627148 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
CGA-204ENST00000627148 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
CGA-204ENST00000627148 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
CGA-204ENST00000627148 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
CGA-204ENST00000627148 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
CGA-204ENST00000627148 HOXD11P31277 338 aaPredicted RBP17.49■□□□□ 0.39
CGA-204ENST00000627148 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
CGA-204ENST00000627148 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
CGA-204ENST00000627148 KCNA4P22459 653 aa17.37■□□□□ 0.37
CGA-204ENST00000627148 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
CGA-204ENST00000627148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
CGA-204ENST00000627148 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
CGA-204ENST00000627148 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
CGA-204ENST00000627148 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
CGA-204ENST00000627148 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
CGA-204ENST00000627148 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
CGA-204ENST00000627148 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
CGA-204ENST00000627148 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
CGA-204ENST00000627148 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
CGA-204ENST00000627148 CAPN15O75808 1086 aa16.07■□□□□ 0.16
CGA-204ENST00000627148 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
CGA-204ENST00000627148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
CGA-204ENST00000627148 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
CGA-204ENST00000627148 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
CGA-204ENST00000627148 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
CGA-204ENST00000627148 ZBTB22O15209 634 aa15.96■□□□□ 0.15
CGA-204ENST00000627148 APLP2Q06481 763 aa15.95■□□□□ 0.14
CGA-204ENST00000627148 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
CGA-204ENST00000627148 DSG3P32926 999 aa15.83■□□□□ 0.12
CGA-204ENST00000627148 ZNF219Q9P2Y4 722 aaPredicted RBP15.8■□□□□ 0.12
CGA-204ENST00000627148 ABCB7O75027 752 aa15.75■□□□□ 0.11
CGA-204ENST00000627148 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
CGA-204ENST00000627148 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
CGA-204ENST00000627148 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
CGA-204ENST00000627148 POLA2Q14181 598 aa15.56■□□□□ 0.08
CGA-204ENST00000627148 ATXN8OSP0DMR3 200 aa15.48■□□□□ 0.07
CGA-204ENST00000627148 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
CGA-204ENST00000627148 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
CGA-204ENST00000627148 FBLN2P98095 1184 aa15.02■□□□□ -0
CGA-204ENST00000627148 OSCARQ8IYS5 282 aa15.02■□□□□ -0
CGA-204ENST00000627148 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
CGA-204ENST00000627148 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
CGA-204ENST00000627148 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
CGA-204ENST00000627148 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
CGA-204ENST00000627148 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
CGA-204ENST00000627148 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
CGA-204ENST00000627148 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
CGA-204ENST00000627148 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
CGA-204ENST00000627148 POTEHQ6S545 545 aa14.6□□□□□ -0.07
CGA-204ENST00000627148 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
CGA-204ENST00000627148 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
CGA-204ENST00000627148 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
CGA-204ENST00000627148 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
CGA-204ENST00000627148 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
CGA-204ENST00000627148 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
CGA-204ENST00000627148 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
CGA-204ENST00000627148 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
CGA-204ENST00000627148 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
CGA-204ENST00000627148 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
CGA-204ENST00000627148 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
CGA-204ENST00000627148 FKBP8Q14318 412 aa14.13□□□□□ -0.15
CGA-204ENST00000627148 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
CGA-204ENST00000627148 HAX1O00165 279 aa14.07□□□□□ -0.16
CGA-204ENST00000627148 PROM2Q8N271 834 aa14.05□□□□□ -0.16
CGA-204ENST00000627148 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
CGA-204ENST00000627148 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
CGA-204ENST00000627148 EVX2Q03828 476 aa13.9□□□□□ -0.18
CGA-204ENST00000627148 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
CGA-204ENST00000627148 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
CGA-204ENST00000627148 MIER1Q8N108 512 aa13.8□□□□□ -0.2
CGA-204ENST00000627148 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
CGA-204ENST00000627148 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
CGA-204ENST00000627148 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
CGA-204ENST00000627148 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
CGA-204ENST00000627148 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
CGA-204ENST00000627148 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
CGA-204ENST00000627148 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
CGA-204ENST00000627148 GABBR2O75899 941 aa13.59□□□□□ -0.23
CGA-204ENST00000627148 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
CGA-204ENST00000627148 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
CGA-204ENST00000627148 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
CGA-204ENST00000627148 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
CGA-204ENST00000627148 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
CGA-204ENST00000627148 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
CGA-204ENST00000627148 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
CGA-204ENST00000627148 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
CGA-204ENST00000627148 CLCN6P51797 869 aa13.41□□□□□ -0.26
CGA-204ENST00000627148 NUBP1P53384 320 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms