RNA–Protein interactions for RNA: ENST00000392924.1

SYCP3-202, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-202ENST00000392924 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
SYCP3-202ENST00000392924 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
SYCP3-202ENST00000392924 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
SYCP3-202ENST00000392924 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
SYCP3-202ENST00000392924 FOXD1Q16676 465 aa21.6■■□□□ 1.05
SYCP3-202ENST00000392924 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
SYCP3-202ENST00000392924 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
SYCP3-202ENST00000392924 ADRA2BP18089 450 aa20.53■□□□□ 0.88
SYCP3-202ENST00000392924 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
SYCP3-202ENST00000392924 MSH5O43196 834 aa19.99■□□□□ 0.79
SYCP3-202ENST00000392924 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SYCP3-202ENST00000392924 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
SYCP3-202ENST00000392924 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
SYCP3-202ENST00000392924 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
SYCP3-202ENST00000392924 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
SYCP3-202ENST00000392924 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
SYCP3-202ENST00000392924 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
SYCP3-202ENST00000392924 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
SYCP3-202ENST00000392924 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
SYCP3-202ENST00000392924 KCNA4P22459 653 aa17.97■□□□□ 0.47
SYCP3-202ENST00000392924 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
SYCP3-202ENST00000392924 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
SYCP3-202ENST00000392924 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
SYCP3-202ENST00000392924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
SYCP3-202ENST00000392924 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
SYCP3-202ENST00000392924 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
SYCP3-202ENST00000392924 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
SYCP3-202ENST00000392924 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
SYCP3-202ENST00000392924 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
SYCP3-202ENST00000392924 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
SYCP3-202ENST00000392924 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
SYCP3-202ENST00000392924 ZBTB22O15209 634 aa16.54■□□□□ 0.24
SYCP3-202ENST00000392924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
SYCP3-202ENST00000392924 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
SYCP3-202ENST00000392924 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
SYCP3-202ENST00000392924 APLP2Q06481 763 aa16.46■□□□□ 0.23
SYCP3-202ENST00000392924 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
SYCP3-202ENST00000392924 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
SYCP3-202ENST00000392924 CAPN15O75808 1086 aa16.37■□□□□ 0.21
SYCP3-202ENST00000392924 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
SYCP3-202ENST00000392924 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
SYCP3-202ENST00000392924 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
SYCP3-202ENST00000392924 DSG3P32926 999 aa16.21■□□□□ 0.19
SYCP3-202ENST00000392924 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
SYCP3-202ENST00000392924 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
SYCP3-202ENST00000392924 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
SYCP3-202ENST00000392924 ABCB7O75027 752 aa16.04■□□□□ 0.16
SYCP3-202ENST00000392924 POLA2Q14181 598 aa15.93■□□□□ 0.14
SYCP3-202ENST00000392924 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
SYCP3-202ENST00000392924 FBLN2P98095 1184 aa15.48■□□□□ 0.07
SYCP3-202ENST00000392924 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
SYCP3-202ENST00000392924 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
SYCP3-202ENST00000392924 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
SYCP3-202ENST00000392924 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
SYCP3-202ENST00000392924 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
SYCP3-202ENST00000392924 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
SYCP3-202ENST00000392924 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
SYCP3-202ENST00000392924 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
SYCP3-202ENST00000392924 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
SYCP3-202ENST00000392924 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
SYCP3-202ENST00000392924 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
SYCP3-202ENST00000392924 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
SYCP3-202ENST00000392924 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
SYCP3-202ENST00000392924 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
SYCP3-202ENST00000392924 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
SYCP3-202ENST00000392924 POTEHQ6S545 545 aa14.77□□□□□ -0.05
SYCP3-202ENST00000392924 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
SYCP3-202ENST00000392924 FKBP8Q14318 412 aa14.68□□□□□ -0.06
SYCP3-202ENST00000392924 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
SYCP3-202ENST00000392924 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
SYCP3-202ENST00000392924 PROM2Q8N271 834 aa14.64□□□□□ -0.07
SYCP3-202ENST00000392924 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
SYCP3-202ENST00000392924 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
SYCP3-202ENST00000392924 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
SYCP3-202ENST00000392924 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
SYCP3-202ENST00000392924 CREBZFQ9NS37 354 aa14.35□□□□□ -0.11
SYCP3-202ENST00000392924 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
SYCP3-202ENST00000392924 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
SYCP3-202ENST00000392924 HAX1O00165 279 aa14.26□□□□□ -0.13
SYCP3-202ENST00000392924 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
SYCP3-202ENST00000392924 MIER1Q8N108 512 aa14.23□□□□□ -0.13
SYCP3-202ENST00000392924 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
SYCP3-202ENST00000392924 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
SYCP3-202ENST00000392924 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
SYCP3-202ENST00000392924 EVX2Q03828 476 aa14.18□□□□□ -0.14
SYCP3-202ENST00000392924 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
SYCP3-202ENST00000392924 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
SYCP3-202ENST00000392924 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
SYCP3-202ENST00000392924 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
SYCP3-202ENST00000392924 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
SYCP3-202ENST00000392924 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
SYCP3-202ENST00000392924 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
SYCP3-202ENST00000392924 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
SYCP3-202ENST00000392924 NUBP1P53384 320 aa13.86□□□□□ -0.19
SYCP3-202ENST00000392924 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
SYCP3-202ENST00000392924 GABBR2O75899 941 aa13.85□□□□□ -0.19
SYCP3-202ENST00000392924 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
SYCP3-202ENST00000392924 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
SYCP3-202ENST00000392924 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
SYCP3-202ENST00000392924 CLCN6P51797 869 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms