RNA–Protein interactions for RNA: ENST00000483112.1

NPM1P29-201, Transcript of nucleophosmin 1 pseudogene 29, humanhuman

BASIC

Gene NPM1P29, Length 803 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P29-201ENST00000483112 AEBP2Q6ZN18 517 aaPredicted RBP25.99■■□□□ 1.75
NPM1P29-201ENST00000483112 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
NPM1P29-201ENST00000483112 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
NPM1P29-201ENST00000483112 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
NPM1P29-201ENST00000483112 FOXD1Q16676 465 aa20.66■□□□□ 0.9
NPM1P29-201ENST00000483112 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
NPM1P29-201ENST00000483112 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
NPM1P29-201ENST00000483112 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
NPM1P29-201ENST00000483112 MSH5O43196 834 aa19.4■□□□□ 0.7
NPM1P29-201ENST00000483112 ADRA2BP18089 450 aa19.4■□□□□ 0.7
NPM1P29-201ENST00000483112 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
NPM1P29-201ENST00000483112 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
NPM1P29-201ENST00000483112 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
NPM1P29-201ENST00000483112 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
NPM1P29-201ENST00000483112 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
NPM1P29-201ENST00000483112 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
NPM1P29-201ENST00000483112 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
NPM1P29-201ENST00000483112 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
NPM1P29-201ENST00000483112 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
NPM1P29-201ENST00000483112 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
NPM1P29-201ENST00000483112 KCNA4P22459 653 aa16.71■□□□□ 0.27
NPM1P29-201ENST00000483112 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
NPM1P29-201ENST00000483112 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
NPM1P29-201ENST00000483112 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
NPM1P29-201ENST00000483112 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
NPM1P29-201ENST00000483112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
NPM1P29-201ENST00000483112 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
NPM1P29-201ENST00000483112 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
NPM1P29-201ENST00000483112 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
NPM1P29-201ENST00000483112 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
NPM1P29-201ENST00000483112 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
NPM1P29-201ENST00000483112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
NPM1P29-201ENST00000483112 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
NPM1P29-201ENST00000483112 APLP2Q06481 763 aa15.71■□□□□ 0.11
NPM1P29-201ENST00000483112 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
NPM1P29-201ENST00000483112 CAPN15O75808 1086 aa15.69■□□□□ 0.1
NPM1P29-201ENST00000483112 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
NPM1P29-201ENST00000483112 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
NPM1P29-201ENST00000483112 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
NPM1P29-201ENST00000483112 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
NPM1P29-201ENST00000483112 DSG3P32926 999 aa15.49■□□□□ 0.07
NPM1P29-201ENST00000483112 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
NPM1P29-201ENST00000483112 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
NPM1P29-201ENST00000483112 ZBTB22O15209 634 aa15.38■□□□□ 0.05
NPM1P29-201ENST00000483112 ABCB7O75027 752 aa15.28■□□□□ 0.04
NPM1P29-201ENST00000483112 POLA2Q14181 598 aa15.09■□□□□ 0.01
NPM1P29-201ENST00000483112 ATF5Q9Y2D1 282 aaPredicted RBP15□□□□□ -0.01
NPM1P29-201ENST00000483112 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
NPM1P29-201ENST00000483112 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
NPM1P29-201ENST00000483112 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
NPM1P29-201ENST00000483112 FBLN2P98095 1184 aa14.6□□□□□ -0.07
NPM1P29-201ENST00000483112 POTEHQ6S545 545 aa14.58□□□□□ -0.08
NPM1P29-201ENST00000483112 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
NPM1P29-201ENST00000483112 AKT1S1Q96B36 256 aa14.55□□□□□ -0.08
NPM1P29-201ENST00000483112 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
NPM1P29-201ENST00000483112 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
NPM1P29-201ENST00000483112 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
NPM1P29-201ENST00000483112 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
NPM1P29-201ENST00000483112 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
NPM1P29-201ENST00000483112 MKRN4PQ13434 485 aaPredicted RBP14.32□□□□□ -0.12
NPM1P29-201ENST00000483112 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
NPM1P29-201ENST00000483112 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
NPM1P29-201ENST00000483112 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
NPM1P29-201ENST00000483112 FKBP8Q14318 412 aa14.13□□□□□ -0.15
NPM1P29-201ENST00000483112 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
NPM1P29-201ENST00000483112 PIP4P2Q8N4L2 257 aa14.08□□□□□ -0.16
NPM1P29-201ENST00000483112 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
NPM1P29-201ENST00000483112 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
NPM1P29-201ENST00000483112 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
NPM1P29-201ENST00000483112 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
NPM1P29-201ENST00000483112 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
NPM1P29-201ENST00000483112 HAX1O00165 279 aa13.86□□□□□ -0.19
NPM1P29-201ENST00000483112 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
NPM1P29-201ENST00000483112 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
NPM1P29-201ENST00000483112 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
NPM1P29-201ENST00000483112 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
NPM1P29-201ENST00000483112 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
NPM1P29-201ENST00000483112 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
NPM1P29-201ENST00000483112 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
NPM1P29-201ENST00000483112 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
NPM1P29-201ENST00000483112 EVX2Q03828 476 aa13.54□□□□□ -0.24
NPM1P29-201ENST00000483112 PROM2Q8N271 834 aa13.5□□□□□ -0.25
NPM1P29-201ENST00000483112 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
NPM1P29-201ENST00000483112 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
NPM1P29-201ENST00000483112 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
NPM1P29-201ENST00000483112 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
NPM1P29-201ENST00000483112 CLCN6P51797 869 aa13.36□□□□□ -0.27
NPM1P29-201ENST00000483112 GABBR2O75899 941 aa13.34□□□□□ -0.27
NPM1P29-201ENST00000483112 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
NPM1P29-201ENST00000483112 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
NPM1P29-201ENST00000483112 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
NPM1P29-201ENST00000483112 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
NPM1P29-201ENST00000483112 MIER1Q8N108 512 aa13.25□□□□□ -0.29
NPM1P29-201ENST00000483112 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
NPM1P29-201ENST00000483112 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
NPM1P29-201ENST00000483112 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
NPM1P29-201ENST00000483112 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
NPM1P29-201ENST00000483112 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
NPM1P29-201ENST00000483112 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
NPM1P29-201ENST00000483112 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms