RNA–Protein interactions for RNA: ENST00000367424.4

CFHR1-202, Transcript of complement factor H related 1, humanhuman

TSL 5 BASIC

Gene CFHR1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-202ENST00000367424 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
CFHR1-202ENST00000367424 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
CFHR1-202ENST00000367424 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
CFHR1-202ENST00000367424 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
CFHR1-202ENST00000367424 FOXD1Q16676 465 aa21.49■■□□□ 1.03
CFHR1-202ENST00000367424 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
CFHR1-202ENST00000367424 MSH5O43196 834 aa20.2■□□□□ 0.82
CFHR1-202ENST00000367424 PIAS4Q8N2W9 510 aaPredicted RBP19.86■□□□□ 0.77
CFHR1-202ENST00000367424 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
CFHR1-202ENST00000367424 ADRA2BP18089 450 aa19.54■□□□□ 0.72
CFHR1-202ENST00000367424 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
CFHR1-202ENST00000367424 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
CFHR1-202ENST00000367424 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
CFHR1-202ENST00000367424 CACNB1Q02641 598 aaPredicted RBP17.78■□□□□ 0.44
CFHR1-202ENST00000367424 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
CFHR1-202ENST00000367424 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
CFHR1-202ENST00000367424 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
CFHR1-202ENST00000367424 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
CFHR1-202ENST00000367424 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
CFHR1-202ENST00000367424 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
CFHR1-202ENST00000367424 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
CFHR1-202ENST00000367424 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
CFHR1-202ENST00000367424 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
CFHR1-202ENST00000367424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
CFHR1-202ENST00000367424 POTEHQ6S545 545 aa16.25■□□□□ 0.19
CFHR1-202ENST00000367424 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
CFHR1-202ENST00000367424 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
CFHR1-202ENST00000367424 DSG3P32926 999 aa15.98■□□□□ 0.15
CFHR1-202ENST00000367424 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
CFHR1-202ENST00000367424 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
CFHR1-202ENST00000367424 CAPN15O75808 1086 aa15.86■□□□□ 0.13
CFHR1-202ENST00000367424 KCNA4P22459 653 aa15.61■□□□□ 0.09
CFHR1-202ENST00000367424 ABCB7O75027 752 aa15.51■□□□□ 0.07
CFHR1-202ENST00000367424 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
CFHR1-202ENST00000367424 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
CFHR1-202ENST00000367424 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
CFHR1-202ENST00000367424 APLP2Q06481 763 aa15.2■□□□□ 0.02
CFHR1-202ENST00000367424 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
CFHR1-202ENST00000367424 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
CFHR1-202ENST00000367424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.09■□□□□ 0.01
CFHR1-202ENST00000367424 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
CFHR1-202ENST00000367424 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
CFHR1-202ENST00000367424 POLA2Q14181 598 aa14.92□□□□□ -0.02
CFHR1-202ENST00000367424 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
CFHR1-202ENST00000367424 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
CFHR1-202ENST00000367424 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
CFHR1-202ENST00000367424 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
CFHR1-202ENST00000367424 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
CFHR1-202ENST00000367424 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
CFHR1-202ENST00000367424 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
CFHR1-202ENST00000367424 HAX1O00165 279 aa14.54□□□□□ -0.08
CFHR1-202ENST00000367424 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
CFHR1-202ENST00000367424 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
CFHR1-202ENST00000367424 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
CFHR1-202ENST00000367424 EVX2Q03828 476 aa14.47□□□□□ -0.09
CFHR1-202ENST00000367424 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
CFHR1-202ENST00000367424 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
CFHR1-202ENST00000367424 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CFHR1-202ENST00000367424 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CFHR1-202ENST00000367424 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
CFHR1-202ENST00000367424 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
CFHR1-202ENST00000367424 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
CFHR1-202ENST00000367424 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
CFHR1-202ENST00000367424 GABBR2O75899 941 aa14□□□□□ -0.17
CFHR1-202ENST00000367424 SPDYE6P0CI01 402 aa14□□□□□ -0.17
CFHR1-202ENST00000367424 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
CFHR1-202ENST00000367424 LHX8Q68G74 356 aa13.98□□□□□ -0.17
CFHR1-202ENST00000367424 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
CFHR1-202ENST00000367424 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
CFHR1-202ENST00000367424 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
CFHR1-202ENST00000367424 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
CFHR1-202ENST00000367424 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
CFHR1-202ENST00000367424 FBLN2P98095 1184 aa13.84□□□□□ -0.19
CFHR1-202ENST00000367424 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
CFHR1-202ENST00000367424 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
CFHR1-202ENST00000367424 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
CFHR1-202ENST00000367424 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
CFHR1-202ENST00000367424 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
CFHR1-202ENST00000367424 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
CFHR1-202ENST00000367424 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
CFHR1-202ENST00000367424 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
CFHR1-202ENST00000367424 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
CFHR1-202ENST00000367424 CLCN6P51797 869 aa13.36□□□□□ -0.27
CFHR1-202ENST00000367424 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
CFHR1-202ENST00000367424 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
CFHR1-202ENST00000367424 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
CFHR1-202ENST00000367424 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
CFHR1-202ENST00000367424 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
CFHR1-202ENST00000367424 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
CFHR1-202ENST00000367424 POTEMA6NI47 508 aa13.2□□□□□ -0.3
CFHR1-202ENST00000367424 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
CFHR1-202ENST00000367424 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
CFHR1-202ENST00000367424 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
CFHR1-202ENST00000367424 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
CFHR1-202ENST00000367424 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
CFHR1-202ENST00000367424 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
CFHR1-202ENST00000367424 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
CFHR1-202ENST00000367424 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
CFHR1-202ENST00000367424 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
CFHR1-202ENST00000367424 FKBP8Q14318 412 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 247.2 ms