RNA–Protein interactions for RNA: ENST00000545133.5

CASC1-205, Transcript of cancer susceptibility 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CASC1, Length 2,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-205ENST00000545133 AEBP2Q6ZN18 517 aaPredicted RBP18.26■□□□□ 0.51
CASC1-205ENST00000545133 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
CASC1-205ENST00000545133 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.07
CASC1-205ENST00000545133 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
CASC1-205ENST00000545133 FOXD1Q16676 465 aa14.41□□□□□ -0.1
CASC1-205ENST00000545133 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
CASC1-205ENST00000545133 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
CASC1-205ENST00000545133 ADRA2BP18089 450 aa13.7□□□□□ -0.22
CASC1-205ENST00000545133 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
CASC1-205ENST00000545133 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
CASC1-205ENST00000545133 MSH5O43196 834 aa13.34□□□□□ -0.27
CASC1-205ENST00000545133 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
CASC1-205ENST00000545133 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
CASC1-205ENST00000545133 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
CASC1-205ENST00000545133 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
CASC1-205ENST00000545133 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
CASC1-205ENST00000545133 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
CASC1-205ENST00000545133 KCNA4P22459 653 aa12.04□□□□□ -0.48
CASC1-205ENST00000545133 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
CASC1-205ENST00000545133 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
CASC1-205ENST00000545133 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
CASC1-205ENST00000545133 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
CASC1-205ENST00000545133 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
CASC1-205ENST00000545133 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
CASC1-205ENST00000545133 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
CASC1-205ENST00000545133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
CASC1-205ENST00000545133 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
CASC1-205ENST00000545133 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
CASC1-205ENST00000545133 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
CASC1-205ENST00000545133 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
CASC1-205ENST00000545133 ZBTB22O15209 634 aa11.1□□□□□ -0.63
CASC1-205ENST00000545133 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
CASC1-205ENST00000545133 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
CASC1-205ENST00000545133 SPINK5Q9NQ38 1064 aaPredicted RBP11□□□□□ -0.65
CASC1-205ENST00000545133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.66
CASC1-205ENST00000545133 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.66
CASC1-205ENST00000545133 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
CASC1-205ENST00000545133 CAPN15O75808 1086 aa10.91□□□□□ -0.66
CASC1-205ENST00000545133 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
CASC1-205ENST00000545133 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
CASC1-205ENST00000545133 APLP2Q06481 763 aa10.85□□□□□ -0.67
CASC1-205ENST00000545133 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
CASC1-205ENST00000545133 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
CASC1-205ENST00000545133 DSG3P32926 999 aa10.81□□□□□ -0.68
CASC1-205ENST00000545133 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
CASC1-205ENST00000545133 ABCB7O75027 752 aa10.72□□□□□ -0.69
CASC1-205ENST00000545133 ATXN8OSP0DMR3 200 aa10.7□□□□□ -0.7
CASC1-205ENST00000545133 POLA2Q14181 598 aa10.62□□□□□ -0.71
CASC1-205ENST00000545133 POTEHQ6S545 545 aa10.61□□□□□ -0.71
CASC1-205ENST00000545133 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
CASC1-205ENST00000545133 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
CASC1-205ENST00000545133 OSCARQ8IYS5 282 aa10.27□□□□□ -0.77
CASC1-205ENST00000545133 FBLN2P98095 1184 aa10.26□□□□□ -0.77
CASC1-205ENST00000545133 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
CASC1-205ENST00000545133 SPDYE2BA6NHP3 402 aa10.11□□□□□ -0.79
CASC1-205ENST00000545133 SPDYE6P0CI01 402 aa10.11□□□□□ -0.79
CASC1-205ENST00000545133 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
CASC1-205ENST00000545133 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
CASC1-205ENST00000545133 ZNF692Q9BU19 519 aaPredicted RBP10.05□□□□□ -0.8
CASC1-205ENST00000545133 SSUH2Q9Y2M2 353 aa10.04□□□□□ -0.8
CASC1-205ENST00000545133 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
CASC1-205ENST00000545133 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
CASC1-205ENST00000545133 CHRDL2Q6WN34 429 aa9.92□□□□□ -0.82
CASC1-205ENST00000545133 PABPN1Q86U42 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
CASC1-205ENST00000545133 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
CASC1-205ENST00000545133 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
CASC1-205ENST00000545133 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
CASC1-205ENST00000545133 FKBP8Q14318 412 aa9.8□□□□□ -0.84
CASC1-205ENST00000545133 PROM2Q8N271 834 aa9.79□□□□□ -0.84
CASC1-205ENST00000545133 FXR2P51116 673 aaKnown RBP eCLIP9.77□□□□□ -0.84
CASC1-205ENST00000545133 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.84
CASC1-205ENST00000545133 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.84
CASC1-205ENST00000545133 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
CASC1-205ENST00000545133 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
CASC1-205ENST00000545133 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
CASC1-205ENST00000545133 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
CASC1-205ENST00000545133 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
CASC1-205ENST00000545133 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
CASC1-205ENST00000545133 HAX1O00165 279 aa9.49□□□□□ -0.89
CASC1-205ENST00000545133 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
CASC1-205ENST00000545133 EVX2Q03828 476 aa9.46□□□□□ -0.89
CASC1-205ENST00000545133 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
CASC1-205ENST00000545133 C19orf67A6NJJ6 358 aa9.44□□□□□ -0.9
CASC1-205ENST00000545133 MIER1Q8N108 512 aa9.44□□□□□ -0.9
CASC1-205ENST00000545133 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.91
CASC1-205ENST00000545133 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
CASC1-205ENST00000545133 CD44P16070 742 aaKnown RBP9.36□□□□□ -0.91
CASC1-205ENST00000545133 PLEKHG5O94827 1062 aa9.35□□□□□ -0.91
CASC1-205ENST00000545133 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
CASC1-205ENST00000545133 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
CASC1-205ENST00000545133 ZBTB47Q9UFB7 747 aaPredicted RBP9.27□□□□□ -0.93
CASC1-205ENST00000545133 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
CASC1-205ENST00000545133 RASEFQ8IZ41 740 aa9.26□□□□□ -0.93
CASC1-205ENST00000545133 NUBP1P53384 320 aa9.25□□□□□ -0.93
CASC1-205ENST00000545133 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
CASC1-205ENST00000545133 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
CASC1-205ENST00000545133 GABBR2O75899 941 aa9.22□□□□□ -0.93
CASC1-205ENST00000545133 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
CASC1-205ENST00000545133 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
CASC1-205ENST00000545133 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms