RNA–Protein interactions for RNA: ENST00000254765.3

POPDC3-201, Transcript of popeye domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POPDC3, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3-201ENST00000254765 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.93
POPDC3-201ENST00000254765 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.77
POPDC3-201ENST00000254765 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
POPDC3-201ENST00000254765 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
POPDC3-201ENST00000254765 FOXD1Q16676 465 aa21.43■■□□□ 1.02
POPDC3-201ENST00000254765 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
POPDC3-201ENST00000254765 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
POPDC3-201ENST00000254765 ADRA2BP18089 450 aa20.43■□□□□ 0.86
POPDC3-201ENST00000254765 PIAS4Q8N2W9 510 aaPredicted RBP20.16■□□□□ 0.82
POPDC3-201ENST00000254765 MSH5O43196 834 aa19.77■□□□□ 0.76
POPDC3-201ENST00000254765 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
POPDC3-201ENST00000254765 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
POPDC3-201ENST00000254765 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
POPDC3-201ENST00000254765 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
POPDC3-201ENST00000254765 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
POPDC3-201ENST00000254765 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
POPDC3-201ENST00000254765 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.46
POPDC3-201ENST00000254765 KCNA4P22459 653 aa17.9■□□□□ 0.46
POPDC3-201ENST00000254765 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
POPDC3-201ENST00000254765 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
POPDC3-201ENST00000254765 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
POPDC3-201ENST00000254765 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
POPDC3-201ENST00000254765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
POPDC3-201ENST00000254765 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
POPDC3-201ENST00000254765 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
POPDC3-201ENST00000254765 RNF39Q9H2S5 420 aa16.96■□□□□ 0.3
POPDC3-201ENST00000254765 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
POPDC3-201ENST00000254765 CACNB1Q02641 598 aaPredicted RBP16.79■□□□□ 0.28
POPDC3-201ENST00000254765 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
POPDC3-201ENST00000254765 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
POPDC3-201ENST00000254765 ZBTB22O15209 634 aa16.48■□□□□ 0.23
POPDC3-201ENST00000254765 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
POPDC3-201ENST00000254765 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
POPDC3-201ENST00000254765 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
POPDC3-201ENST00000254765 CAPN15O75808 1086 aa16.34■□□□□ 0.21
POPDC3-201ENST00000254765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
POPDC3-201ENST00000254765 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
POPDC3-201ENST00000254765 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
POPDC3-201ENST00000254765 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
POPDC3-201ENST00000254765 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
POPDC3-201ENST00000254765 APLP2Q06481 763 aa16.18■□□□□ 0.18
POPDC3-201ENST00000254765 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
POPDC3-201ENST00000254765 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
POPDC3-201ENST00000254765 ABCB7O75027 752 aa16.06■□□□□ 0.16
POPDC3-201ENST00000254765 DSG3P32926 999 aa16.06■□□□□ 0.16
POPDC3-201ENST00000254765 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
POPDC3-201ENST00000254765 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
POPDC3-201ENST00000254765 POLA2Q14181 598 aa15.83■□□□□ 0.12
POPDC3-201ENST00000254765 ZBTB12Q9Y330 459 aaPredicted RBP15.43■□□□□ 0.06
POPDC3-201ENST00000254765 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
POPDC3-201ENST00000254765 FBLN2P98095 1184 aa15.33■□□□□ 0.04
POPDC3-201ENST00000254765 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
POPDC3-201ENST00000254765 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
POPDC3-201ENST00000254765 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
POPDC3-201ENST00000254765 SPDYE6P0CI01 402 aa15.02■□□□□ -0
POPDC3-201ENST00000254765 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
POPDC3-201ENST00000254765 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
POPDC3-201ENST00000254765 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
POPDC3-201ENST00000254765 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
POPDC3-201ENST00000254765 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
POPDC3-201ENST00000254765 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
POPDC3-201ENST00000254765 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
POPDC3-201ENST00000254765 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
POPDC3-201ENST00000254765 PITPNM1O00562 1244 aa14.79□□□□□ -0.04
POPDC3-201ENST00000254765 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
POPDC3-201ENST00000254765 POTEHQ6S545 545 aa14.66□□□□□ -0.06
POPDC3-201ENST00000254765 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
POPDC3-201ENST00000254765 FKBP8Q14318 412 aa14.64□□□□□ -0.07
POPDC3-201ENST00000254765 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
POPDC3-201ENST00000254765 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
POPDC3-201ENST00000254765 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
POPDC3-201ENST00000254765 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
POPDC3-201ENST00000254765 PROM2Q8N271 834 aa14.43□□□□□ -0.1
POPDC3-201ENST00000254765 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
POPDC3-201ENST00000254765 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
POPDC3-201ENST00000254765 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
POPDC3-201ENST00000254765 HAX1O00165 279 aa14.21□□□□□ -0.13
POPDC3-201ENST00000254765 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
POPDC3-201ENST00000254765 MIER1Q8N108 512 aa14.12□□□□□ -0.15
POPDC3-201ENST00000254765 EVX2Q03828 476 aa14.1□□□□□ -0.15
POPDC3-201ENST00000254765 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
POPDC3-201ENST00000254765 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
POPDC3-201ENST00000254765 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
POPDC3-201ENST00000254765 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
POPDC3-201ENST00000254765 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
POPDC3-201ENST00000254765 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
POPDC3-201ENST00000254765 SP7Q8TDD2 431 aaPredicted RBP13.95□□□□□ -0.18
POPDC3-201ENST00000254765 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
POPDC3-201ENST00000254765 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
POPDC3-201ENST00000254765 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
POPDC3-201ENST00000254765 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
POPDC3-201ENST00000254765 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
POPDC3-201ENST00000254765 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
POPDC3-201ENST00000254765 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
POPDC3-201ENST00000254765 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
POPDC3-201ENST00000254765 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
POPDC3-201ENST00000254765 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
POPDC3-201ENST00000254765 GABBR2O75899 941 aa13.75□□□□□ -0.21
POPDC3-201ENST00000254765 NUBP1P53384 320 aa13.74□□□□□ -0.21
POPDC3-201ENST00000254765 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms