RNA–Protein interactions for RNA: ENST00000384730.1

RNU6-253P-201, Transcript of RNA, U6 small nuclear 253, pseudogene, humanhuman

BASIC

Gene RNU6-253P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-253P-201ENST00000384730 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
RNU6-253P-201ENST00000384730 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
RNU6-253P-201ENST00000384730 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
RNU6-253P-201ENST00000384730 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
RNU6-253P-201ENST00000384730 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
RNU6-253P-201ENST00000384730 FOXD1Q16676 465 aa17.18■□□□□ 0.34
RNU6-253P-201ENST00000384730 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
RNU6-253P-201ENST00000384730 ADRA2BP18089 450 aa16.52■□□□□ 0.24
RNU6-253P-201ENST00000384730 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
RNU6-253P-201ENST00000384730 MSH5O43196 834 aa15.84■□□□□ 0.13
RNU6-253P-201ENST00000384730 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
RNU6-253P-201ENST00000384730 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
RNU6-253P-201ENST00000384730 KCNA4P22459 653 aa15.08■□□□□ 0
RNU6-253P-201ENST00000384730 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
RNU6-253P-201ENST00000384730 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
RNU6-253P-201ENST00000384730 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
RNU6-253P-201ENST00000384730 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
RNU6-253P-201ENST00000384730 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
RNU6-253P-201ENST00000384730 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
RNU6-253P-201ENST00000384730 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
RNU6-253P-201ENST00000384730 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
RNU6-253P-201ENST00000384730 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
RNU6-253P-201ENST00000384730 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
RNU6-253P-201ENST00000384730 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
RNU6-253P-201ENST00000384730 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
RNU6-253P-201ENST00000384730 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
RNU6-253P-201ENST00000384730 ZBTB22O15209 634 aa13.92□□□□□ -0.18
RNU6-253P-201ENST00000384730 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
RNU6-253P-201ENST00000384730 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
RNU6-253P-201ENST00000384730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNU6-253P-201ENST00000384730 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
RNU6-253P-201ENST00000384730 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
RNU6-253P-201ENST00000384730 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
RNU6-253P-201ENST00000384730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
RNU6-253P-201ENST00000384730 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
RNU6-253P-201ENST00000384730 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
RNU6-253P-201ENST00000384730 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
RNU6-253P-201ENST00000384730 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
RNU6-253P-201ENST00000384730 APLP2Q06481 763 aa13.34□□□□□ -0.27
RNU6-253P-201ENST00000384730 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
RNU6-253P-201ENST00000384730 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
RNU6-253P-201ENST00000384730 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
RNU6-253P-201ENST00000384730 CAPN15O75808 1086 aa13.06□□□□□ -0.32
RNU6-253P-201ENST00000384730 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
RNU6-253P-201ENST00000384730 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
RNU6-253P-201ENST00000384730 DSG3P32926 999 aa12.94□□□□□ -0.34
RNU6-253P-201ENST00000384730 POLA2Q14181 598 aa12.87□□□□□ -0.35
RNU6-253P-201ENST00000384730 ABCB7O75027 752 aa12.82□□□□□ -0.36
RNU6-253P-201ENST00000384730 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
RNU6-253P-201ENST00000384730 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
RNU6-253P-201ENST00000384730 FBLN2P98095 1184 aa12.67□□□□□ -0.38
RNU6-253P-201ENST00000384730 FKBP8Q14318 412 aa12.48□□□□□ -0.41
RNU6-253P-201ENST00000384730 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
RNU6-253P-201ENST00000384730 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
RNU6-253P-201ENST00000384730 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
RNU6-253P-201ENST00000384730 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
RNU6-253P-201ENST00000384730 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
RNU6-253P-201ENST00000384730 PROM2Q8N271 834 aa12.41□□□□□ -0.42
RNU6-253P-201ENST00000384730 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
RNU6-253P-201ENST00000384730 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
RNU6-253P-201ENST00000384730 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
RNU6-253P-201ENST00000384730 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
RNU6-253P-201ENST00000384730 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
RNU6-253P-201ENST00000384730 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
RNU6-253P-201ENST00000384730 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
RNU6-253P-201ENST00000384730 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
RNU6-253P-201ENST00000384730 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
RNU6-253P-201ENST00000384730 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
RNU6-253P-201ENST00000384730 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
RNU6-253P-201ENST00000384730 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
RNU6-253P-201ENST00000384730 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
RNU6-253P-201ENST00000384730 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
RNU6-253P-201ENST00000384730 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNU6-253P-201ENST00000384730 CHRDL2Q6WN34 429 aa11.74□□□□□ -0.53
RNU6-253P-201ENST00000384730 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
RNU6-253P-201ENST00000384730 MIER1Q8N108 512 aa11.7□□□□□ -0.54
RNU6-253P-201ENST00000384730 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
RNU6-253P-201ENST00000384730 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
RNU6-253P-201ENST00000384730 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
RNU6-253P-201ENST00000384730 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
RNU6-253P-201ENST00000384730 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
RNU6-253P-201ENST00000384730 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
RNU6-253P-201ENST00000384730 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
RNU6-253P-201ENST00000384730 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
RNU6-253P-201ENST00000384730 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
RNU6-253P-201ENST00000384730 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
RNU6-253P-201ENST00000384730 NUBP1P53384 320 aa11.52□□□□□ -0.57
RNU6-253P-201ENST00000384730 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
RNU6-253P-201ENST00000384730 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
RNU6-253P-201ENST00000384730 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
RNU6-253P-201ENST00000384730 PKD2Q13563 968 aa11.41□□□□□ -0.58
RNU6-253P-201ENST00000384730 RASEFQ8IZ41 740 aa11.4□□□□□ -0.58
RNU6-253P-201ENST00000384730 GSE1Q14687 1217 aa11.38□□□□□ -0.59
RNU6-253P-201ENST00000384730 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
RNU6-253P-201ENST00000384730 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
RNU6-253P-201ENST00000384730 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
RNU6-253P-201ENST00000384730 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
RNU6-253P-201ENST00000384730 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
RNU6-253P-201ENST00000384730 POTEHQ6S545 545 aa11.28□□□□□ -0.6
RNU6-253P-201ENST00000384730 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms