RNA–Protein interactions for RNA: ENST00000272895.11

ABCA12-201, Transcript of ATP binding cassette subfamily A member 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA12, Length 9,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA12-201ENST00000272895 NISCHQ9Y2I1 1504 aa8.99□□□□□ -0.97
ABCA12-201ENST00000272895 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
ABCA12-201ENST00000272895 SUPT5HO00267 1087 aaKnown RBP7.82□□□□□ -1.16
ABCA12-201ENST00000272895 SHROOM4Q9ULL8 1493 aa7.81□□□□□ -1.16
ABCA12-201ENST00000272895 ABCC9O60706 1549 aa7.68□□□□□ -1.18
ABCA12-201ENST00000272895 FAM9AQ8IZU1 332 aaPredicted RBP7.65□□□□□ -1.18
ABCA12-201ENST00000272895 CCDC180Q9P1Z9 1646 aa7.57□□□□□ -1.2
ABCA12-201ENST00000272895 ZCCHC6Q5VYS8 1495 aaKnown RBP7.47□□□□□ -1.21
ABCA12-201ENST00000272895 APLP2Q06481 763 aa7.47□□□□□ -1.21
ABCA12-201ENST00000272895 TRIM41Q8WV44 630 aa7.43□□□□□ -1.22
ABCA12-201ENST00000272895 PABPN1Q86U42 306 aaKnown RBP eCLIP7.43□□□□□ -1.22
ABCA12-201ENST00000272895 RB1CC1Q8TDY2 1594 aa7.4□□□□□ -1.23
ABCA12-201ENST00000272895 NACADO15069 1562 aa7.39□□□□□ -1.23
ABCA12-201ENST00000272895 DCAF1Q9Y4B6 1507 aa7.37□□□□□ -1.23
ABCA12-201ENST00000272895 MYO15BQ96JP2 1530 aa7.3□□□□□ -1.24
ABCA12-201ENST00000272895 SCRIBQ14160 1630 aa7.29□□□□□ -1.24
ABCA12-201ENST00000272895 UBTFP17480 764 aaKnown RBP7.26□□□□□ -1.25
ABCA12-201ENST00000272895 EHMT2Q96KQ7 1210 aa7.19□□□□□ -1.26
ABCA12-201ENST00000272895 CHIC1Q5VXU3 224 aa7.16□□□□□ -1.26
ABCA12-201ENST00000272895 ATP1B4Q9UN42 357 aaPredicted RBP7.13□□□□□ -1.27
ABCA12-201ENST00000272895 RANGAP1P46060 587 aaPredicted RBP7.09□□□□□ -1.27
ABCA12-201ENST00000272895 BAZ1AQ9NRL2 1556 aaPredicted RBP7.08□□□□□ -1.28
ABCA12-201ENST00000272895 BAZ1BQ9UIG0 1483 aaKnown RBP7.06□□□□□ -1.28
ABCA12-201ENST00000272895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.06□□□□□ -1.28
ABCA12-201ENST00000272895 HNRNPUL2Q1KMD3 747 aaKnown RBP7.06□□□□□ -1.28
ABCA12-201ENST00000272895 RSF1Q96T23 1441 aaPredicted RBP7.06□□□□□ -1.28
ABCA12-201ENST00000272895 ZEB1P37275 1124 aaPredicted RBP7.05□□□□□ -1.28
ABCA12-201ENST00000272895 CSRNP3Q8WYN3 585 aa7.05□□□□□ -1.28
ABCA12-201ENST00000272895 EEA1Q15075 1411 aa7□□□□□ -1.29
ABCA12-201ENST00000272895 SMARCA2P51531 1590 aa6.99□□□□□ -1.29
ABCA12-201ENST00000272895 CDK11AQ9UQ88 783 aaPredicted RBP6.99□□□□□ -1.29
ABCA12-201ENST00000272895 FBLN2P98095 1184 aa6.99□□□□□ -1.29
ABCA12-201ENST00000272895 MYT1LQ9UL68 1186 aa6.96□□□□□ -1.29
ABCA12-201ENST00000272895 PDS5BQ9NTI5 1447 aa6.96□□□□□ -1.3
ABCA12-201ENST00000272895 NPM1P06748 294 aaKnown RBP eCLIP6.95□□□□□ -1.3
ABCA12-201ENST00000272895 TTBK1Q5TCY1 1321 aaPredicted RBP6.93□□□□□ -1.3
ABCA12-201ENST00000272895 WRNQ14191 1432 aaPredicted RBP eCLIP6.92□□□□□ -1.3
ABCA12-201ENST00000272895 CECR2Q9BXF3 1484 aa6.92□□□□□ -1.3
ABCA12-201ENST00000272895 ERCC6Q03468 1493 aa6.92□□□□□ -1.3
ABCA12-201ENST00000272895 TRIM26Q12899 539 aaPredicted RBP6.92□□□□□ -1.3
ABCA12-201ENST00000272895 CHMP7Q8WUX9 453 aaPredicted RBP6.92□□□□□ -1.3
ABCA12-201ENST00000272895 CCER1Q8TC90 406 aaPredicted RBP6.9□□□□□ -1.3
ABCA12-201ENST00000272895 CADPSQ9ULU8 1353 aa6.89□□□□□ -1.31
ABCA12-201ENST00000272895 KIF27Q86VH2 1401 aa6.89□□□□□ -1.31
ABCA12-201ENST00000272895 PCGF6Q9BYE7 350 aa6.89□□□□□ -1.31
ABCA12-201ENST00000272895 ATAD2BQ9ULI0 1458 aa6.88□□□□□ -1.31
ABCA12-201ENST00000272895 ACIN1Q9UKV3 1341 aaKnown RBP6.87□□□□□ -1.31
ABCA12-201ENST00000272895 NCAPD3P42695 1498 aa6.87□□□□□ -1.31
ABCA12-201ENST00000272895 LOC105371045A0A1W2PR82 267 aa6.86□□□□□ -1.31
ABCA12-201ENST00000272895 MROH2BQ7Z745 1585 aa6.84□□□□□ -1.31
ABCA12-201ENST00000272895 TOP2AP11388 1531 aaKnown RBP6.83□□□□□ -1.32
ABCA12-201ENST00000272895 ABCC8Q09428 1581 aa6.83□□□□□ -1.32
ABCA12-201ENST00000272895 CEP164Q9UPV0 1460 aa6.83□□□□□ -1.32
ABCA12-201ENST00000272895 PELP1Q8IZL8 1130 aaKnown RBP6.81□□□□□ -1.32
ABCA12-201ENST00000272895 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
ABCA12-201ENST00000272895 GOLGA3Q08378 1498 aa6.8□□□□□ -1.32
ABCA12-201ENST00000272895 CCDC88BA6NC98 1476 aa6.8□□□□□ -1.32
ABCA12-201ENST00000272895 ITGAEP38570 1179 aa6.79□□□□□ -1.32
ABCA12-201ENST00000272895 P3H3Q8IVL6 736 aa6.78□□□□□ -1.32
ABCA12-201ENST00000272895 PLEKHD1A6NEE1 506 aa6.77□□□□□ -1.33
ABCA12-201ENST00000272895 ESF1Q9H501 851 aaKnown RBP6.77□□□□□ -1.33
ABCA12-201ENST00000272895 TNIKQ9UKE5 1360 aa6.76□□□□□ -1.33
ABCA12-201ENST00000272895 SMARCA4P51532 1647 aa6.76□□□□□ -1.33
ABCA12-201ENST00000272895 CARMIL1Q5VZK9 1371 aa6.76□□□□□ -1.33
ABCA12-201ENST00000272895 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
ABCA12-201ENST00000272895 SOGA1O94964 1423 aa6.76□□□□□ -1.33
ABCA12-201ENST00000272895 CLIP1P30622 1438 aa6.76□□□□□ -1.33
ABCA12-201ENST00000272895 CUX2O14529 1486 aa6.75□□□□□ -1.33
ABCA12-201ENST00000272895 CARMIL2Q6F5E8 1435 aa6.74□□□□□ -1.33
ABCA12-201ENST00000272895 TSPY4P0CV99 314 aa6.73□□□□□ -1.33
ABCA12-201ENST00000272895 TSPY10P0CW01 314 aa6.73□□□□□ -1.33
ABCA12-201ENST00000272895 MTUS2Q5JR59 1369 aa6.73□□□□□ -1.33
ABCA12-201ENST00000272895 EIF4G1Q04637 1599 aaKnown RBP6.73□□□□□ -1.33
ABCA12-201ENST00000272895 PPARGC1BQ86YN6 1023 aaKnown RBP6.73□□□□□ -1.33
ABCA12-201ENST00000272895 HMGXB3Q12766 1538 aa6.71□□□□□ -1.33
ABCA12-201ENST00000272895 FANCD2Q9BXW9 1451 aa6.71□□□□□ -1.33
ABCA12-201ENST00000272895 FHAD1B1AJZ9 1412 aa6.71□□□□□ -1.33
ABCA12-201ENST00000272895 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
ABCA12-201ENST00000272895 CENPBP07199 599 aaPredicted RBP6.68□□□□□ -1.34
ABCA12-201ENST00000272895 TDRD9Q8NDG6 1382 aaKnown RBP6.67□□□□□ -1.34
ABCA12-201ENST00000272895 ARID3CA6NKF2 412 aa6.67□□□□□ -1.34
ABCA12-201ENST00000272895 CFTRP13569 1480 aa6.65□□□□□ -1.34
ABCA12-201ENST00000272895 CEP162Q5TB80 1403 aa6.65□□□□□ -1.34
ABCA12-201ENST00000272895 RAPGEF2Q9Y4G8 1499 aa6.65□□□□□ -1.35
ABCA12-201ENST00000272895 FMN1Q68DA7 1419 aa6.64□□□□□ -1.35
ABCA12-201ENST00000272895 OSCARQ8IYS5 282 aa6.64□□□□□ -1.35
ABCA12-201ENST00000272895 CFDP1Q9UEE9 299 aaPredicted RBP6.63□□□□□ -1.35
ABCA12-201ENST00000272895 MRC2Q9UBG0 1479 aa6.62□□□□□ -1.35
ABCA12-201ENST00000272895 IFT140Q96RY7 1462 aa6.61□□□□□ -1.35
ABCA12-201ENST00000272895 STAG3Q9UJ98 1225 aa6.61□□□□□ -1.35
ABCA12-201ENST00000272895 CCNB3Q8WWL7 1395 aa6.61□□□□□ -1.35
ABCA12-201ENST00000272895 KCNH8Q96L42 1107 aa6.61□□□□□ -1.35
ABCA12-201ENST00000272895 RSPH4AQ5TD94 716 aa6.6□□□□□ -1.35
ABCA12-201ENST00000272895 WIZO95785 1651 aa6.6□□□□□ -1.35
ABCA12-201ENST00000272895 JPH4Q96JJ6 628 aa6.59□□□□□ -1.35
ABCA12-201ENST00000272895 EFCAB2Q5VUJ9 269 aa6.59□□□□□ -1.35
ABCA12-201ENST00000272895 BICRAQ9NZM4 1560 aa6.59□□□□□ -1.35
ABCA12-201ENST00000272895 HRCP23327 699 aa6.59□□□□□ -1.35
ABCA12-201ENST00000272895 NEFLP07196 543 aa6.58□□□□□ -1.36
ABCA12-201ENST00000272895 BCANQ96GW7 911 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms