RNA–Protein interactions for RNA: ENST00000283256.10

SCN2A-201, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN2A, Length 8,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-201ENST00000283256 MYT1Q01538 1121 aa9.03□□□□□ -0.96
SCN2A-201ENST00000283256 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
SCN2A-201ENST00000283256 TTBK1Q5TCY1 1321 aaPredicted RBP8.53□□□□□ -1.04
SCN2A-201ENST00000283256 YTHDC1Q96MU7 727 aaKnown RBP8.38□□□□□ -1.07
SCN2A-201ENST00000283256 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
SCN2A-201ENST00000283256 ERICH6Q7L0X2 663 aa8.22□□□□□ -1.09
SCN2A-201ENST00000283256 RANGAP1P46060 587 aaPredicted RBP8.12□□□□□ -1.11
SCN2A-201ENST00000283256 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
SCN2A-201ENST00000283256 GLIPR1L2Q4G1C9 344 aa7.87□□□□□ -1.15
SCN2A-201ENST00000283256 DAXXQ9UER7 740 aaPredicted RBP7.69□□□□□ -1.18
SCN2A-201ENST00000283256 NEFLP07196 543 aa7.68□□□□□ -1.18
SCN2A-201ENST00000283256 CLSPNQ9HAW4 1339 aa7.63□□□□□ -1.19
SCN2A-201ENST00000283256 RTL5Q5HYW3 569 aaPredicted RBP7.63□□□□□ -1.19
SCN2A-201ENST00000283256 DCAF8L2P0C7V8 631 aa7.6□□□□□ -1.19
SCN2A-201ENST00000283256 NISCHQ9Y2I1 1504 aa7.59□□□□□ -1.19
SCN2A-201ENST00000283256 SLC24A1O60721 1099 aa7.58□□□□□ -1.2
SCN2A-201ENST00000283256 ZEB1P37275 1124 aaPredicted RBP7.57□□□□□ -1.2
SCN2A-201ENST00000283256 POLR3GLQ9BT43 218 aa7.56□□□□□ -1.2
SCN2A-201ENST00000283256 MYT1LQ9UL68 1186 aa7.49□□□□□ -1.21
SCN2A-201ENST00000283256 EHMT2Q96KQ7 1210 aa7.48□□□□□ -1.21
SCN2A-201ENST00000283256 KAT6BQ8WYB5 2073 aa7.44□□□□□ -1.22
SCN2A-201ENST00000283256 ZNF316A6NFI3 1004 aaPredicted RBP7.43□□□□□ -1.22
SCN2A-201ENST00000283256 TNNT2P45379 298 aaPredicted RBP7.42□□□□□ -1.22
SCN2A-201ENST00000283256 EIF5BO60841 1220 aaKnown RBP7.41□□□□□ -1.22
SCN2A-201ENST00000283256 FAM9AQ8IZU1 332 aaPredicted RBP7.4□□□□□ -1.23
SCN2A-201ENST00000283256 NCLP19338 710 aaKnown RBP7.38□□□□□ -1.23
SCN2A-201ENST00000283256 CDK11BP21127 795 aaKnown RBP7.31□□□□□ -1.24
SCN2A-201ENST00000283256 ZNF326Q5BKZ1 582 aaKnown RBP7.3□□□□□ -1.24
SCN2A-201ENST00000283256 ANP32BQ92688 251 aaKnown RBP7.29□□□□□ -1.24
SCN2A-201ENST00000283256 TRIM44Q96DX7 344 aaPredicted RBP7.29□□□□□ -1.24
SCN2A-201ENST00000283256 PTMSP20962 102 aa7.25□□□□□ -1.25
SCN2A-201ENST00000283256 APLP2Q06481 763 aa7.21□□□□□ -1.26
SCN2A-201ENST00000283256 CALRP27797 417 aaKnown RBP7.16□□□□□ -1.26
SCN2A-201ENST00000283256 ATP1B4Q9UN42 357 aaPredicted RBP7.15□□□□□ -1.27
SCN2A-201ENST00000283256 CDK11AQ9UQ88 783 aaPredicted RBP7.11□□□□□ -1.27
SCN2A-201ENST00000283256 ANP32AP39687 249 aaKnown RBP7.1□□□□□ -1.27
SCN2A-201ENST00000283256 PCGF6Q9BYE7 350 aa7.1□□□□□ -1.27
SCN2A-201ENST00000283256 HMGB1P09429 215 aaKnown RBP7.09□□□□□ -1.27
SCN2A-201ENST00000283256 ANP32EQ9BTT0 268 aa7.02□□□□□ -1.29
SCN2A-201ENST00000283256 ERICH6BQ5W0A0 696 aa7.01□□□□□ -1.29
SCN2A-201ENST00000283256 NEFMP07197 916 aa6.97□□□□□ -1.29
SCN2A-201ENST00000283256 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
SCN2A-201ENST00000283256 LAS1LQ9Y4W2 734 aaKnown RBP6.95□□□□□ -1.3
SCN2A-201ENST00000283256 HRCP23327 699 aa6.94□□□□□ -1.3
SCN2A-201ENST00000283256 TNNT3P45378 269 aaPredicted RBP6.94□□□□□ -1.3
SCN2A-201ENST00000283256 APPP05067 770 aa6.93□□□□□ -1.3
SCN2A-201ENST00000283256 BCL11AQ9H165 835 aa6.92□□□□□ -1.3
SCN2A-201ENST00000283256 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
SCN2A-201ENST00000283256 ZBTB47Q9UFB7 747 aaPredicted RBP6.92□□□□□ -1.3
SCN2A-201ENST00000283256 HOMEZQ8IX15 550 aa6.92□□□□□ -1.3
SCN2A-201ENST00000283256 STK11IPQ8N1F8 1099 aa6.91□□□□□ -1.3
SCN2A-201ENST00000283256 GON4LQ3T8J9 2241 aa6.9□□□□□ -1.3
SCN2A-201ENST00000283256 A0A0U1RQG5 324 aaPredicted RBP6.9□□□□□ -1.31
SCN2A-201ENST00000283256 GTF3C3Q9Y5Q9 886 aa6.89□□□□□ -1.31
SCN2A-201ENST00000283256 ARID4BQ4LE39 1312 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-201ENST00000283256 UPF2Q9HAU5 1272 aaKnown RBP6.88□□□□□ -1.31
SCN2A-201ENST00000283256 HSP90AA1P07900 732 aaKnown RBP6.88□□□□□ -1.31
SCN2A-201ENST00000283256 PNNQ9H307 717 aaKnown RBP6.88□□□□□ -1.31
SCN2A-201ENST00000283256 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
SCN2A-201ENST00000283256 NAP1L5Q96NT1 182 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-201ENST00000283256 SUPT5HO00267 1087 aaKnown RBP6.86□□□□□ -1.31
SCN2A-201ENST00000283256 SETQ01105 290 aaPredicted RBP6.84□□□□□ -1.31
SCN2A-201ENST00000283256 CHAF1AQ13111 956 aaPredicted RBP6.84□□□□□ -1.31
SCN2A-201ENST00000283256 TRIM26Q12899 539 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-201ENST00000283256 AMER1Q5JTC6 1135 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-201ENST00000283256 DIEXFQ68CQ4 756 aaKnown RBP6.83□□□□□ -1.32
SCN2A-201ENST00000283256 NEFHP12036 1026 aa6.82□□□□□ -1.32
SCN2A-201ENST00000283256 USP35Q9P2H5 1018 aa6.82□□□□□ -1.32
SCN2A-201ENST00000283256 DNTTIP2Q5QJE6 756 aaKnown RBP6.82□□□□□ -1.32
SCN2A-201ENST00000283256 C14orf37Q86TY3 774 aa6.82□□□□□ -1.32
SCN2A-201ENST00000283256 HAP1P54257 671 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-201ENST00000283256 GOLGA6L6A8MZA4 724 aa6.8□□□□□ -1.32
SCN2A-201ENST00000283256 NBR1Q14596 966 aa6.79□□□□□ -1.32
SCN2A-201ENST00000283256 L1TD1Q5T7N2 865 aaKnown RBP6.77□□□□□ -1.33
SCN2A-201ENST00000283256 GOLGA6L1Q8N7Z2 621 aa6.77□□□□□ -1.33
SCN2A-201ENST00000283256 MEX3CQ5U5Q3 659 aaKnown RBP6.77□□□□□ -1.33
SCN2A-201ENST00000283256 DDRGK1Q96HY6 314 aa6.76□□□□□ -1.33
SCN2A-201ENST00000283256 NRDCO43847 1150 aa6.75□□□□□ -1.33
SCN2A-201ENST00000283256 MYO10Q9HD67 2058 aa6.75□□□□□ -1.33
SCN2A-201ENST00000283256 ACIN1Q9UKV3 1341 aaKnown RBP6.74□□□□□ -1.33
SCN2A-201ENST00000283256 NPM2Q86SE8 214 aaKnown RBP6.74□□□□□ -1.33
SCN2A-201ENST00000283256 RSPH6AQ9H0K4 717 aa6.73□□□□□ -1.33
SCN2A-201ENST00000283256 DCAF1Q9Y4B6 1507 aa6.73□□□□□ -1.33
SCN2A-201ENST00000283256 BECN1Q14457 450 aa6.73□□□□□ -1.33
SCN2A-201ENST00000283256 HSP90AA2PQ14568 343 aaPredicted RBP6.73□□□□□ -1.33
SCN2A-201ENST00000283256 GOLGA6L3A6NEY3 463 aa6.73□□□□□ -1.33
SCN2A-201ENST00000283256 PTMAP06454 111 aaKnown RBP6.72□□□□□ -1.33
SCN2A-201ENST00000283256 GOLGA6L4A6NEF3 574 aa6.72□□□□□ -1.33
SCN2A-201ENST00000283256 HMGB1P1B2RPK0 211 aaPredicted RBP6.72□□□□□ -1.33
SCN2A-201ENST00000283256 MSNP26038 577 aaKnown RBP6.71□□□□□ -1.33
SCN2A-201ENST00000283256 PKNOX2Q96KN3 472 aa6.71□□□□□ -1.33
SCN2A-201ENST00000283256 ARXQ96QS3 562 aa6.7□□□□□ -1.34
SCN2A-201ENST00000283256 MYH10P35580 1976 aa6.69□□□□□ -1.34
SCN2A-201ENST00000283256 ANP32CO43423 234 aa6.69□□□□□ -1.34
SCN2A-201ENST00000283256 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
SCN2A-201ENST00000283256 BCANQ96GW7 911 aa6.68□□□□□ -1.34
SCN2A-201ENST00000283256 NOM1Q5C9Z4 860 aaKnown RBP6.68□□□□□ -1.34
SCN2A-201ENST00000283256 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.67□□□□□ -1.34
SCN2A-201ENST00000283256 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
SCN2A-201ENST00000283256 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms