Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
KRTAP3-3Q9BYR6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 HSPA8P16-201ENST00000454171 1865 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC091152.2-201ENST00000591628 2569 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 GH2-201ENST00000332800 1138 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU6-884P-201ENST00000363889 107 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU6-975P-201ENST00000384296 105 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 Y_RNA.532-201ENST00000384590 113 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC069257.2-201ENST00000441819 155 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL865P-201ENST00000466711 289 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AL451124.1-201ENST00000478520 1026 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL344P-201ENST00000485522 296 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL653P-201ENST00000494134 293 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 LSM3P4-201ENST00000502948 309 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 SNORA70.16-201ENST00000516390 95 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU7-25P-201ENST00000516544 62 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU5F-4P-201ENST00000516581 114 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 IGLV3-31-201ENST00000523713 297 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 TUBB4BP4-201ENST00000527023 304 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC233290.2-201ENST00000552852 390 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC013283.1-201ENST00000557282 492 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR4484-201ENST00000582855 83 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR1587-201ENST00000583319 53 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC026254.3-201ENST00000584490 322 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC048344.3-201ENST00000605512 251 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR1273H-201ENST00000612921 116 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 TARS-216ENST00000627006 171 ntTSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC023824.7-201ENST00000623041 5731 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 HERC2P8-202ENST00000564334 3705 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF138-202ENST00000359735 2679 ntTSL 4 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 AC020904.2-202ENST00000614660 1401 ntBASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
KRTAP3-3Q9BYR6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 EDA-213ENST00000616899 4643 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AC009487.4-201ENST00000624969 3585 ntBASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-3Q9BYR6 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms