RNA–Protein interactions for RNA: ENST00000516581.1

RNU5F-4P-201, Transcript of RNA, U5F small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU5F-4P, Length 114 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5F-4P-201ENST00000516581 AEBP2Q6ZN18 517 aaPredicted RBP10.5□□□□□ -0.73
RNU5F-4P-201ENST00000516581 CHIC1Q5VXU3 224 aa10.43□□□□□ -0.74
RNU5F-4P-201ENST00000516581 PHF23Q9BUL5 403 aaPredicted RBP9.17□□□□□ -0.94
RNU5F-4P-201ENST00000516581 SENP3Q9H4L4 574 aaPredicted RBP8.9□□□□□ -0.98
RNU5F-4P-201ENST00000516581 PLPPR3Q6T4P5 718 aa8.54□□□□□ -1.04
RNU5F-4P-201ENST00000516581 FOXD1Q16676 465 aa8.23□□□□□ -1.09
RNU5F-4P-201ENST00000516581 PPP6R1Q9UPN7 881 aa8.02□□□□□ -1.13
RNU5F-4P-201ENST00000516581 ADRA2BP18089 450 aa8□□□□□ -1.13
RNU5F-4P-201ENST00000516581 PIAS4Q8N2W9 510 aaPredicted RBP7.77□□□□□ -1.17
RNU5F-4P-201ENST00000516581 MSH5O43196 834 aa7.55□□□□□ -1.2
RNU5F-4P-201ENST00000516581 PPP4R3CPQ6ZMV5 832 aa7.52□□□□□ -1.21
RNU5F-4P-201ENST00000516581 KCNA4P22459 653 aa7.51□□□□□ -1.21
RNU5F-4P-201ENST00000516581 NCBP3Q53F19 620 aaKnown RBP7.38□□□□□ -1.23
RNU5F-4P-201ENST00000516581 SCAF1Q9H7N4 1312 aaKnown RBP7.37□□□□□ -1.23
RNU5F-4P-201ENST00000516581 CNKSR2Q8WXI2 1034 aa7.3□□□□□ -1.24
RNU5F-4P-201ENST00000516581 NPM3O75607 178 aaKnown RBP7.27□□□□□ -1.25
RNU5F-4P-201ENST00000516581 POTEDQ86YR6 584 aa7.26□□□□□ -1.25
RNU5F-4P-201ENST00000516581 MAPK8IP2Q13387 824 aaPredicted RBP7.2□□□□□ -1.26
RNU5F-4P-201ENST00000516581 SLC4A1APQ9BWU0 796 aaKnown RBP7.17□□□□□ -1.26
RNU5F-4P-201ENST00000516581 DNAJC5BQ9UF47 199 aa7.17□□□□□ -1.26
RNU5F-4P-201ENST00000516581 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
RNU5F-4P-201ENST00000516581 RNF216Q9NWF9 866 aaPredicted RBP7.13□□□□□ -1.27
RNU5F-4P-201ENST00000516581 EHMT2Q96KQ7 1210 aa7.09□□□□□ -1.27
RNU5F-4P-201ENST00000516581 HOXD11P31277 338 aaPredicted RBP7.08□□□□□ -1.28
RNU5F-4P-201ENST00000516581 CSRNP3Q8WYN3 585 aa7.02□□□□□ -1.29
RNU5F-4P-201ENST00000516581 ZBTB22O15209 634 aa6.92□□□□□ -1.3
RNU5F-4P-201ENST00000516581 FOXD4L1Q9NU39 408 aa6.9□□□□□ -1.3
RNU5F-4P-201ENST00000516581 SLC4A2P04920 1241 aa6.84□□□□□ -1.31
RNU5F-4P-201ENST00000516581 MYCNP04198 464 aaPredicted RBP6.72□□□□□ -1.33
RNU5F-4P-201ENST00000516581 DCAF8L1A6NGE4 600 aa6.7□□□□□ -1.34
RNU5F-4P-201ENST00000516581 ATXN8OSP0DMR3 200 aa6.69□□□□□ -1.34
RNU5F-4P-201ENST00000516581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.66□□□□□ -1.34
RNU5F-4P-201ENST00000516581 U3KPZ7 1027 aaPredicted RBP6.62□□□□□ -1.35
RNU5F-4P-201ENST00000516581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.61□□□□□ -1.35
RNU5F-4P-201ENST00000516581 HNRNPUL2Q1KMD3 747 aaKnown RBP6.61□□□□□ -1.35
RNU5F-4P-201ENST00000516581 SAMD1Q6SPF0 538 aaPredicted RBP6.58□□□□□ -1.36
RNU5F-4P-201ENST00000516581 APLP2Q06481 763 aa6.5□□□□□ -1.37
RNU5F-4P-201ENST00000516581 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
RNU5F-4P-201ENST00000516581 RNF39Q9H2S5 420 aa6.48□□□□□ -1.37
RNU5F-4P-201ENST00000516581 C1QBPQ07021 282 aaKnown RBP6.43□□□□□ -1.38
RNU5F-4P-201ENST00000516581 ZNF219Q9P2Y4 722 aaPredicted RBP6.4□□□□□ -1.38
RNU5F-4P-201ENST00000516581 SPINK5Q9NQ38 1064 aaPredicted RBP6.35□□□□□ -1.39
RNU5F-4P-201ENST00000516581 FKBP8Q14318 412 aa6.3□□□□□ -1.4
RNU5F-4P-201ENST00000516581 CAPN15O75808 1086 aa6.29□□□□□ -1.4
RNU5F-4P-201ENST00000516581 TRHP20396 242 aaPredicted RBP6.29□□□□□ -1.4
RNU5F-4P-201ENST00000516581 POLA2Q14181 598 aa6.26□□□□□ -1.41
RNU5F-4P-201ENST00000516581 MKRN4PQ13434 485 aaPredicted RBP6.25□□□□□ -1.41
RNU5F-4P-201ENST00000516581 FBLN2P98095 1184 aa6.22□□□□□ -1.41
RNU5F-4P-201ENST00000516581 ZBTB12Q9Y330 459 aaPredicted RBP6.22□□□□□ -1.41
RNU5F-4P-201ENST00000516581 DSG3P32926 999 aa6.21□□□□□ -1.42
RNU5F-4P-201ENST00000516581 ABCB7O75027 752 aa6.17□□□□□ -1.42
RNU5F-4P-201ENST00000516581 CACNB1Q02641 598 aaPredicted RBP6.17□□□□□ -1.42
RNU5F-4P-201ENST00000516581 PROM2Q8N271 834 aa6.17□□□□□ -1.42
RNU5F-4P-201ENST00000516581 SPDYE4A6NLX3 237 aa6.16□□□□□ -1.42
RNU5F-4P-201ENST00000516581 FBXO3Q9UK99 471 aa6.08□□□□□ -1.44
RNU5F-4P-201ENST00000516581 SPDYE2BA6NHP3 402 aa6.07□□□□□ -1.44
RNU5F-4P-201ENST00000516581 SPDYE6P0CI01 402 aa6.07□□□□□ -1.44
RNU5F-4P-201ENST00000516581 SPDYE2Q495Y8 402 aa6.07□□□□□ -1.44
RNU5F-4P-201ENST00000516581 AMER1Q5JTC6 1135 aaPredicted RBP6.06□□□□□ -1.44
RNU5F-4P-201ENST00000516581 SSUH2Q9Y2M2 353 aa6.04□□□□□ -1.44
RNU5F-4P-201ENST00000516581 OSCARQ8IYS5 282 aa6.03□□□□□ -1.44
RNU5F-4P-201ENST00000516581 ZNF692Q9BU19 519 aaPredicted RBP6.01□□□□□ -1.45
RNU5F-4P-201ENST00000516581 RTN4Q9NQC3 1192 aaKnown RBP6.01□□□□□ -1.45
RNU5F-4P-201ENST00000516581 VASPP50552 380 aaPredicted RBP5.98□□□□□ -1.45
RNU5F-4P-201ENST00000516581 PABPN1Q86U42 306 aaKnown RBP eCLIP5.94□□□□□ -1.46
RNU5F-4P-201ENST00000516581 STAG3Q9UJ98 1225 aa5.94□□□□□ -1.46
RNU5F-4P-201ENST00000516581 RBM42Q9BTD8 480 aaKnown RBP5.93□□□□□ -1.46
RNU5F-4P-201ENST00000516581 IFNLR1Q8IU57 520 aaPredicted RBP5.91□□□□□ -1.46
RNU5F-4P-201ENST00000516581 AKT1S1Q96B36 256 aa5.89□□□□□ -1.47
RNU5F-4P-201ENST00000516581 SPDYE1Q8NFV5 336 aaPredicted RBP5.83□□□□□ -1.48
RNU5F-4P-201ENST00000516581 PLCD3Q8N3E9 789 aa5.81□□□□□ -1.48
RNU5F-4P-201ENST00000516581 SPOCK2Q92563 424 aa5.81□□□□□ -1.48
RNU5F-4P-201ENST00000516581 REM2Q8IYK8 340 aaPredicted RBP5.8□□□□□ -1.48
RNU5F-4P-201ENST00000516581 MIER1Q8N108 512 aa5.8□□□□□ -1.48
RNU5F-4P-201ENST00000516581 ZBTB47Q9UFB7 747 aaPredicted RBP5.8□□□□□ -1.48
RNU5F-4P-201ENST00000516581 PLEKHG5O94827 1062 aa5.78□□□□□ -1.48
RNU5F-4P-201ENST00000516581 PKD2Q13563 968 aa5.78□□□□□ -1.48
RNU5F-4P-201ENST00000516581 KLHL34Q8N239 644 aa5.78□□□□□ -1.48
RNU5F-4P-201ENST00000516581 PITPNM1O00562 1244 aa5.73□□□□□ -1.49
RNU5F-4P-201ENST00000516581 PRR29P0C7W0 189 aa5.73□□□□□ -1.49
RNU5F-4P-201ENST00000516581 CREBZFQ9NS37 354 aa5.72□□□□□ -1.49
RNU5F-4P-201ENST00000516581 CLEC11AQ9Y240 323 aa5.72□□□□□ -1.49
RNU5F-4P-201ENST00000516581 MNX1P50219 401 aaPredicted RBP5.71□□□□□ -1.5
RNU5F-4P-201ENST00000516581 SLC24A1O60721 1099 aa5.69□□□□□ -1.5
RNU5F-4P-201ENST00000516581 NUBP1P53384 320 aa5.69□□□□□ -1.5
RNU5F-4P-201ENST00000516581 TRIM41Q8WV44 630 aa5.69□□□□□ -1.5
RNU5F-4P-201ENST00000516581 ECM2O94769 699 aaPredicted RBP5.67□□□□□ -1.5
RNU5F-4P-201ENST00000516581 GSE1Q14687 1217 aa5.67□□□□□ -1.5
RNU5F-4P-201ENST00000516581 POTEHQ6S545 545 aa5.64□□□□□ -1.51
RNU5F-4P-201ENST00000516581 CIZ1Q9ULV3 898 aaPredicted RBP5.64□□□□□ -1.51
RNU5F-4P-201ENST00000516581 RGL2O15211 777 aa5.63□□□□□ -1.51
RNU5F-4P-201ENST00000516581 NPM1P06748 294 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU5F-4P-201ENST00000516581 FXR2P51116 673 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU5F-4P-201ENST00000516581 CHRM1P11229 460 aaPredicted RBP5.62□□□□□ -1.51
RNU5F-4P-201ENST00000516581 FAM212AQ96EL1 285 aa5.62□□□□□ -1.51
RNU5F-4P-201ENST00000516581 PLCB2Q00722 1185 aa5.6□□□□□ -1.51
RNU5F-4P-201ENST00000516581 RASEFQ8IZ41 740 aa5.6□□□□□ -1.51
RNU5F-4P-201ENST00000516581 DCAF8Q5TAQ9 597 aa5.59□□□□□ -1.51
RNU5F-4P-201ENST00000516581 CHRDL2Q6WN34 429 aa5.59□□□□□ -1.51
RNU5F-4P-201ENST00000516581 FARP1Q9Y4F1 1045 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms