RNA–Protein interactions for RNA: ENST00000392937.10

BACE1-202, Transcript of beta-secretase 1, humanhuman

TSL 1 (best) BASIC

Gene BACE1, Length 5,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-202ENST00000392937 NISCHQ9Y2I1 1504 aa16.37■□□□□ 0.21
BACE1-202ENST00000392937 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
BACE1-202ENST00000392937 SHROOM4Q9ULL8 1493 aa14.74□□□□□ -0.05
BACE1-202ENST00000392937 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
BACE1-202ENST00000392937 ABCC9O60706 1549 aa14.16□□□□□ -0.14
BACE1-202ENST00000392937 ZEB1P37275 1124 aaPredicted RBP13.85□□□□□ -0.19
BACE1-202ENST00000392937 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
BACE1-202ENST00000392937 CCDC180Q9P1Z9 1646 aa13.8□□□□□ -0.2
BACE1-202ENST00000392937 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
BACE1-202ENST00000392937 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
BACE1-202ENST00000392937 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
BACE1-202ENST00000392937 APLP2Q06481 763 aa13.69□□□□□ -0.22
BACE1-202ENST00000392937 PCGF6Q9BYE7 350 aa13.64□□□□□ -0.23
BACE1-202ENST00000392937 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
BACE1-202ENST00000392937 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
BACE1-202ENST00000392937 CHIC1Q5VXU3 224 aa13.54□□□□□ -0.24
BACE1-202ENST00000392937 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
BACE1-202ENST00000392937 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
BACE1-202ENST00000392937 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
BACE1-202ENST00000392937 HRCP23327 699 aa13.45□□□□□ -0.26
BACE1-202ENST00000392937 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
BACE1-202ENST00000392937 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
BACE1-202ENST00000392937 CENPBP07199 599 aaPredicted RBP13.4□□□□□ -0.26
BACE1-202ENST00000392937 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
BACE1-202ENST00000392937 NACADO15069 1562 aa13.34□□□□□ -0.27
BACE1-202ENST00000392937 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.27
BACE1-202ENST00000392937 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
BACE1-202ENST00000392937 DCAF1Q9Y4B6 1507 aa13.28□□□□□ -0.28
BACE1-202ENST00000392937 MYT1Q01538 1121 aa13.14□□□□□ -0.31
BACE1-202ENST00000392937 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
BACE1-202ENST00000392937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
BACE1-202ENST00000392937 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
BACE1-202ENST00000392937 FBLN2P98095 1184 aa13□□□□□ -0.33
BACE1-202ENST00000392937 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
BACE1-202ENST00000392937 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
BACE1-202ENST00000392937 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
BACE1-202ENST00000392937 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
BACE1-202ENST00000392937 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
BACE1-202ENST00000392937 NEFLP07196 543 aa12.88□□□□□ -0.35
BACE1-202ENST00000392937 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
BACE1-202ENST00000392937 EEA1Q15075 1411 aa12.85□□□□□ -0.35
BACE1-202ENST00000392937 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
BACE1-202ENST00000392937 ITGAEP38570 1179 aa12.81□□□□□ -0.36
BACE1-202ENST00000392937 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
BACE1-202ENST00000392937 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
BACE1-202ENST00000392937 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
BACE1-202ENST00000392937 YTHDC1Q96MU7 727 aaKnown RBP12.71□□□□□ -0.37
BACE1-202ENST00000392937 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
BACE1-202ENST00000392937 ERCC6Q03468 1493 aa12.68□□□□□ -0.38
BACE1-202ENST00000392937 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
BACE1-202ENST00000392937 FAM50AQ14320 339 aaKnown RBP12.67□□□□□ -0.38
BACE1-202ENST00000392937 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
BACE1-202ENST00000392937 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
BACE1-202ENST00000392937 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
BACE1-202ENST00000392937 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
BACE1-202ENST00000392937 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
BACE1-202ENST00000392937 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
BACE1-202ENST00000392937 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
BACE1-202ENST00000392937 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
BACE1-202ENST00000392937 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
BACE1-202ENST00000392937 TNIKQ9UKE5 1360 aa12.57□□□□□ -0.4
BACE1-202ENST00000392937 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
BACE1-202ENST00000392937 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
BACE1-202ENST00000392937 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
BACE1-202ENST00000392937 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
BACE1-202ENST00000392937 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
BACE1-202ENST00000392937 ACIN1Q9UKV3 1341 aaKnown RBP12.51□□□□□ -0.41
BACE1-202ENST00000392937 CLIP1P30622 1438 aa12.51□□□□□ -0.41
BACE1-202ENST00000392937 TOP2AP11388 1531 aaKnown RBP12.5□□□□□ -0.41
BACE1-202ENST00000392937 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
BACE1-202ENST00000392937 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
BACE1-202ENST00000392937 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
BACE1-202ENST00000392937 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
BACE1-202ENST00000392937 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
BACE1-202ENST00000392937 ANP32CO43423 234 aa12.43□□□□□ -0.42
BACE1-202ENST00000392937 GTF3C3Q9Y5Q9 886 aa12.42□□□□□ -0.42
BACE1-202ENST00000392937 WIZO95785 1651 aa12.42□□□□□ -0.42
BACE1-202ENST00000392937 POLR3GLQ9BT43 218 aa12.39□□□□□ -0.43
BACE1-202ENST00000392937 CUX2O14529 1486 aa12.37□□□□□ -0.43
BACE1-202ENST00000392937 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
BACE1-202ENST00000392937 MTUS2Q5JR59 1369 aa12.34□□□□□ -0.43
BACE1-202ENST00000392937 SOGA1O94964 1423 aa12.33□□□□□ -0.44
BACE1-202ENST00000392937 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
BACE1-202ENST00000392937 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
BACE1-202ENST00000392937 PLEKHD1A6NEE1 506 aa12.32□□□□□ -0.44
BACE1-202ENST00000392937 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
BACE1-202ENST00000392937 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
BACE1-202ENST00000392937 TONSLQ96HA7 1378 aa12.29□□□□□ -0.44
BACE1-202ENST00000392937 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
BACE1-202ENST00000392937 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
BACE1-202ENST00000392937 KCNH8Q96L42 1107 aa12.27□□□□□ -0.44
BACE1-202ENST00000392937 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
BACE1-202ENST00000392937 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
BACE1-202ENST00000392937 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
BACE1-202ENST00000392937 DAXXQ9UER7 740 aaPredicted RBP12.26□□□□□ -0.45
BACE1-202ENST00000392937 FHAD1B1AJZ9 1412 aa12.26□□□□□ -0.45
BACE1-202ENST00000392937 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
BACE1-202ENST00000392937 ZNF326Q5BKZ1 582 aaKnown RBP12.24□□□□□ -0.45
BACE1-202ENST00000392937 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
BACE1-202ENST00000392937 BCANQ96GW7 911 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms