RNA–Protein interactions for RNA: ENST00000357570.9

CACNA1E-201, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 7,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-201ENST00000357570 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
CACNA1E-201ENST00000357570 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
CACNA1E-201ENST00000357570 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
CACNA1E-201ENST00000357570 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
CACNA1E-201ENST00000357570 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
CACNA1E-201ENST00000357570 APLP2Q06481 763 aa17.03■□□□□ 0.32
CACNA1E-201ENST00000357570 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
CACNA1E-201ENST00000357570 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
CACNA1E-201ENST00000357570 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
CACNA1E-201ENST00000357570 NISCHQ9Y2I1 1504 aa16.72■□□□□ 0.27
CACNA1E-201ENST00000357570 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
CACNA1E-201ENST00000357570 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
CACNA1E-201ENST00000357570 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
CACNA1E-201ENST00000357570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
CACNA1E-201ENST00000357570 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
CACNA1E-201ENST00000357570 PCGF6Q9BYE7 350 aa16.29■□□□□ 0.2
CACNA1E-201ENST00000357570 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
CACNA1E-201ENST00000357570 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
CACNA1E-201ENST00000357570 ERICH6Q7L0X2 663 aa16.07■□□□□ 0.16
CACNA1E-201ENST00000357570 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
CACNA1E-201ENST00000357570 CCER1Q8TC90 406 aaPredicted RBP16.02■□□□□ 0.16
CACNA1E-201ENST00000357570 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.15
CACNA1E-201ENST00000357570 PPARGC1BQ86YN6 1023 aaKnown RBP15.97■□□□□ 0.15
CACNA1E-201ENST00000357570 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
CACNA1E-201ENST00000357570 ITGAEP38570 1179 aa15.96■□□□□ 0.14
CACNA1E-201ENST00000357570 YTHDC1Q96MU7 727 aaKnown RBP15.78■□□□□ 0.12
CACNA1E-201ENST00000357570 NEFLP07196 543 aa15.74■□□□□ 0.11
CACNA1E-201ENST00000357570 FBLN2P98095 1184 aa15.72■□□□□ 0.11
CACNA1E-201ENST00000357570 CENPBP07199 599 aaPredicted RBP15.66■□□□□ 0.1
CACNA1E-201ENST00000357570 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
CACNA1E-201ENST00000357570 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
CACNA1E-201ENST00000357570 BCANQ96GW7 911 aa15.64■□□□□ 0.09
CACNA1E-201ENST00000357570 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
CACNA1E-201ENST00000357570 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
CACNA1E-201ENST00000357570 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
CACNA1E-201ENST00000357570 ABCC9O60706 1549 aa15.47■□□□□ 0.07
CACNA1E-201ENST00000357570 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
CACNA1E-201ENST00000357570 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
CACNA1E-201ENST00000357570 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
CACNA1E-201ENST00000357570 ARID3CA6NKF2 412 aa15.38■□□□□ 0.05
CACNA1E-201ENST00000357570 MYT1Q01538 1121 aa15.36■□□□□ 0.05
CACNA1E-201ENST00000357570 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
CACNA1E-201ENST00000357570 ZNF326Q5BKZ1 582 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-201ENST00000357570 ESF1Q9H501 851 aaKnown RBP15.34■□□□□ 0.05
CACNA1E-201ENST00000357570 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
CACNA1E-201ENST00000357570 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
CACNA1E-201ENST00000357570 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
CACNA1E-201ENST00000357570 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
CACNA1E-201ENST00000357570 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
CACNA1E-201ENST00000357570 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
CACNA1E-201ENST00000357570 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
CACNA1E-201ENST00000357570 A0A0G2JS52 829 aa15.15■□□□□ 0.02
CACNA1E-201ENST00000357570 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
CACNA1E-201ENST00000357570 CHGAP10645 457 aaKnown RBP15.13■□□□□ 0.01
CACNA1E-201ENST00000357570 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
CACNA1E-201ENST00000357570 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
CACNA1E-201ENST00000357570 NEFMP07197 916 aa15.08■□□□□ 0
CACNA1E-201ENST00000357570 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
CACNA1E-201ENST00000357570 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
CACNA1E-201ENST00000357570 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
CACNA1E-201ENST00000357570 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
CACNA1E-201ENST00000357570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.03
CACNA1E-201ENST00000357570 C14orf37Q86TY3 774 aa14.85□□□□□ -0.03
CACNA1E-201ENST00000357570 HRCP23327 699 aa14.82□□□□□ -0.04
CACNA1E-201ENST00000357570 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
CACNA1E-201ENST00000357570 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
CACNA1E-201ENST00000357570 HAP1P54257 671 aaPredicted RBP14.79□□□□□ -0.04
CACNA1E-201ENST00000357570 RTL5Q5HYW3 569 aaPredicted RBP14.78□□□□□ -0.04
CACNA1E-201ENST00000357570 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
CACNA1E-201ENST00000357570 ANP32CO43423 234 aa14.76□□□□□ -0.05
CACNA1E-201ENST00000357570 NPM2Q86SE8 214 aaKnown RBP14.72□□□□□ -0.05
CACNA1E-201ENST00000357570 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
CACNA1E-201ENST00000357570 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
CACNA1E-201ENST00000357570 ARXQ96QS3 562 aa14.68□□□□□ -0.06
CACNA1E-201ENST00000357570 PPP1R15AO75807 674 aaPredicted RBP14.67□□□□□ -0.06
CACNA1E-201ENST00000357570 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
CACNA1E-201ENST00000357570 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
CACNA1E-201ENST00000357570 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
CACNA1E-201ENST00000357570 KDM2AQ9Y2K7 1162 aa14.58□□□□□ -0.07
CACNA1E-201ENST00000357570 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
CACNA1E-201ENST00000357570 NPHP1O15259 732 aa14.54□□□□□ -0.08
CACNA1E-201ENST00000357570 TULP1O00294 542 aaPredicted RBP14.53□□□□□ -0.08
CACNA1E-201ENST00000357570 HSP90AA1P07900 732 aaKnown RBP14.52□□□□□ -0.09
CACNA1E-201ENST00000357570 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
CACNA1E-201ENST00000357570 TSPY4P0CV99 314 aa14.5□□□□□ -0.09
CACNA1E-201ENST00000357570 TSPY10P0CW01 314 aa14.5□□□□□ -0.09
CACNA1E-201ENST00000357570 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
CACNA1E-201ENST00000357570 MLECQ14165 292 aa14.43□□□□□ -0.1
CACNA1E-201ENST00000357570 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
CACNA1E-201ENST00000357570 PPM1GO15355 546 aaPredicted RBP14.4□□□□□ -0.1
CACNA1E-201ENST00000357570 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
CACNA1E-201ENST00000357570 TONSLQ96HA7 1378 aa14.4□□□□□ -0.1
CACNA1E-201ENST00000357570 FAM9BQ8IZU0 186 aa14.4□□□□□ -0.1
CACNA1E-201ENST00000357570 CDK11BP21127 795 aaKnown RBP14.39□□□□□ -0.11
CACNA1E-201ENST00000357570 WDR43Q15061 677 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNA1E-201ENST00000357570 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
CACNA1E-201ENST00000357570 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
CACNA1E-201ENST00000357570 PLEKHD1A6NEE1 506 aa14.3□□□□□ -0.12
CACNA1E-201ENST00000357570 UPF2Q9HAU5 1272 aaKnown RBP14.3□□□□□ -0.12
CACNA1E-201ENST00000357570 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms