Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 AC007952.6-201ENST00000573168 2673 ntBASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 AC003957.1-201ENST00000625108 2673 ntBASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DNMT3AQ9Y6K1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 AC008040.2-201ENST00000461049 708 ntBASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 BX088651.1-201ENST00000540551 451 ntBASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 FITM1-202ENST00000559294 800 ntBASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.88■□□□□ 0.61
DNMT3AQ9Y6K1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 TSPY21P-201ENST00000433481 731 ntBASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 AC079598.2-202ENST00000546624 1451 ntBASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 AP005242.2-201ENST00000580065 1175 ntBASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.87■□□□□ 0.61
DNMT3AQ9Y6K1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AC096733.2-201ENST00000609937 1394 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 MMP23A-201ENST00000234610 1017 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 TSPY15P-201ENST00000457163 923 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AC097488.1-201ENST00000507834 756 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 PRSS44-201ENST00000515154 1146 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AC073912.3-201ENST00000624414 853 ntBASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DNMT3AQ9Y6K1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms