Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 BCL2-203ENST00000589955 5011 ntBASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 HLA-G-202ENST00000376815 851 ntBASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 HLA-G-203ENST00000376818 1127 ntBASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 TEX21P-204ENST00000641479 1693 ntBASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 AC004854.2-201ENST00000608450 1441 ntBASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB1Q9Y5G3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGB1Q9Y5G3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 AC080038.1-201ENST00000611274 1154 ntBASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGB1Q9Y5G3 AL512353.2-201ENST00000448759 1962 ntBASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 MYCNOS-205ENST00000641950 531 ntBASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB1Q9Y5G3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms