Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AL355355.2-201ENST00000442321 338 ntBASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB3Q9Y5E6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 HTR7P1-201ENST00000538670 1336 ntBASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 AC087499.1-201ENST00000418141 1075 ntBASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 AF186192.3-201ENST00000583427 947 ntBASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB3Q9Y5E6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 KRT16P6-202ENST00000425692 1426 ntBASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 AC009237.14-201ENST00000609975 1594 ntBASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB3Q9Y5E6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PCDHB3Q9Y5E6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 AL355075.4-201ENST00000554988 638 ntBASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 AC026471.5-201ENST00000615068 467 ntBASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB3Q9Y5E6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms