Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UBQLN3Q9H347 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 AC004408.2-201ENST00000623613 2777 ntBASIC17.85■□□□□ 0.45
UBQLN3Q9H347 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 AL353708.3-201ENST00000610272 989 ntBASIC17.85■□□□□ 0.45
UBQLN3Q9H347 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN3Q9H347 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 AL032819.2-201ENST00000624543 2162 ntBASIC17.84■□□□□ 0.45
UBQLN3Q9H347 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 KRT18P16-201ENST00000510337 1294 ntBASIC17.84■□□□□ 0.45
UBQLN3Q9H347 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN3Q9H347 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.83■□□□□ 0.45
UBQLN3Q9H347 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN3Q9H347 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.83■□□□□ 0.44
UBQLN3Q9H347 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN3Q9H347 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN3Q9H347 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms