Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC68Q9H2F9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 KRT17P3-201ENST00000420566 1262 ntBASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 AP003097.1-201ENST00000530657 1135 ntBASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC68Q9H2F9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 ZNF815P-204ENST00000434898 1737 ntBASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC68Q9H2F9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC68Q9H2F9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC68Q9H2F9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC68Q9H2F9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC68Q9H2F9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC68Q9H2F9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC68Q9H2F9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC68Q9H2F9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms